Gene RPD_3971 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_3971 
Symbol 
ID4024488 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp4418005 
End bp4418997 
Gene Length993 bp 
Protein Length330 aa 
Translation table11 
GC content57% 
IMG OID637964174 
Productfilamentation induced by cAMP protein Fic 
Protein accessionYP_571091 
Protein GI91978432 
COG category[D] Cell cycle control, cell division, chromosome partitioning 
COG ID[COG2184] Protein involved in cell division 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGATTTTC AGTCGCTTAG ATGCTATAAG GAAAGAGGAG GAAGTCCTCA TGTCCGGCCA 
GCAAAATGTG ACTGCCGTTT TGATTGCCGA CTTGGCGCGG CAACATCAGG TCCAACTGTC
CGAAACAGAG GCCAATGTCC TCGCGCATCA TATGACCCGG CTGGCGGACG ACGTCGTCGT
GTTGGACGAT ATCGAGCGGA CATTGTTGTC ACTGCAGCGC GCAGGACATT TAAGCCGGCG
CGCCATGGTG GAACTACAAG CGCGCTACTT GCGCGAATCC AGACCGTGAC TTTCGATCCT
TTCGGCGATT TCGAGACGCA AGGCTACCTG CGCAATTTCG CGAATGAGAA GGACCTCGAA
ATTGTTCGCA GACTGGAACA CACTTCATTT GCGAGCGGTC TGCCCGAAGC GTTCGCGCGG
CTCGCCGACG TCGATGTCAT TCAATACGAT CATGTTCTGG AGACCCATCG TATTTTGTTC
GATGCGATCT ATCCCTGGGC TGGACAGGAT CGCACCCAGA CGGCGCCCGA TCTCGCCGTC
AGCAAGGCAG GCGTGTTGTT CGCTCATCCC CAGGATATCC GGCCCGCCAT TGAGTACGCG
CTGAAGCACG GTCAGGATCG CGCCTTCATG TCCGCTAAAG TCGGCGAAGT GATGGGCTAT
CTGGCGTACG CACACCCGTT TCTCGACGGC AATGGCCGGA CGATCATGGT CATCCATTCG
GTCCTGGCAC AGCGAGCCGG TTTCAGCATC GATTGGGCAC GGACCGACAA GACCGAATAC
CTACTCGCCT TGACCAGAGA ACTCGATACG CCAGCCAAGG GCATTCTCGA CCGCTACCTG
CAGCCATTCA CAGCAAGGCC GATCGCATAC GAACGCCCGG AGACATGGTA CTTCAGACGC
CCGGCCTTGC TGGTGTCTTG GGAGACGCGA ACATCGTCTT GGGCAACAAT TCCGACCCCG
AGTTACGCGC TCGATATGAA CATCAGAGAA TGA
 
Protein sequence
MDFQSLRCYK ERGGSPHVRP AKCDCRFDCR LGAATSGPTV RNRGQCPRAS YDPAGGRRRR 
VGRYRADIVV TAARRTFKPA RHGGTTSALL ARIQTVTFDP FGDFETQGYL RNFANEKDLE
IVRRLEHTSF ASGLPEAFAR LADVDVIQYD HVLETHRILF DAIYPWAGQD RTQTAPDLAV
SKAGVLFAHP QDIRPAIEYA LKHGQDRAFM SAKVGEVMGY LAYAHPFLDG NGRTIMVIHS
VLAQRAGFSI DWARTDKTEY LLALTRELDT PAKGILDRYL QPFTARPIAY ERPETWYFRR
PALLVSWETR TSSWATIPTP SYALDMNIRE