| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_3967 |
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| Symbol | |
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| ID | 4024484 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | - |
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| Start bp | 4414558 |
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| End bp | 4415121 |
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| Gene Length | 564 bp |
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| Protein Length | 187 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637964170 |
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| Product | peptidase C56, PfpI |
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| Protein accession | YP_571087 |
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| Protein GI | 91978428 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0693] Putative intracellular protease/amidase |
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| TIGRFAM ID | [TIGR01382] intracellular protease, PfpI family |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.578899 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCAGGCC AAATCGAGGG CAAGCGCGTT CTCATTCTCG CCACCCACGG CTTCGAACAG
TCGGAACTCG AAGTGCCGCG CGATCGGCTG AAAGCGGCCG GCGCGCAGGT CGATATCGTG
TCGCCGGAAC AGGGCGAGAT CAAAGGCTGG GAAGGCAAGG ATTGGGGCCG CCCGGTCAAG
GTCGACAAGG CGCTCAGCGC GGTGAAGGCC GACGATTACG ATGCGATCGT GCTACCGGGC
GGGCAGATCA ATCCGGATCT GCTGCGCGTC AATGCCGACG CGCTGAAGCT GATCAAGTCG
TTCTTCGACG CCGGCAAGAC GGTCGCGGCG GTGTGTCATG CGCCGTGGTT GCTGATCGAG
GCCGGCATCG CCAAGGGTCG CAAGATGACG TCCTACAATT CGATCAAGCA GGACGTGATC
AATGCCGGCG CGAAGTGGGA GGATTCCGCG GTGGTCACCG ATAACGGCGT GATCACCTCG
CGCAATCCGG GCGACCTCGA GGCGTTTTCG GACAAGATCA TCGAGGAAAT CCGCGAAGGC
CGGCATCAGC GCCGCGCGGC GTAA
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| Protein sequence | MAGQIEGKRV LILATHGFEQ SELEVPRDRL KAAGAQVDIV SPEQGEIKGW EGKDWGRPVK
VDKALSAVKA DDYDAIVLPG GQINPDLLRV NADALKLIKS FFDAGKTVAA VCHAPWLLIE
AGIAKGRKMT SYNSIKQDVI NAGAKWEDSA VVTDNGVITS RNPGDLEAFS DKIIEEIREG
RHQRRAA
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