| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_3962 |
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| Symbol | mnmA |
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| ID | 4024479 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | - |
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| Start bp | 4409165 |
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| End bp | 4410373 |
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| Gene Length | 1209 bp |
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| Protein Length | 402 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637964165 |
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| Product | tRNA-specific 2-thiouridylase MnmA |
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| Protein accession | YP_571082 |
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| Protein GI | 91978423 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0482] Predicted tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase, contains the PP-loop ATPase domain |
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| TIGRFAM ID | [TIGR00420] tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTGAAA GCATGCTCAA CAGCCTGGAT CTGGAAGGTC GCCCGCAGGA CACCCGCGTC
GTGGTTGCGA TGTCGGGCGG GGTCGATTCA TCGGCCACGG CTGCGCTGCT GAAGTCGCAG
GGTTACGATG TCGTCGGCAT CACGCTGCAG CTCTACGACC ACGGCGCCGC CACCCATCGC
AAGGGCGCCT GCTGCGCCGG CCAGGACATC CACGACGCCC GCGCTGTCGC CGAGCGCATC
GGCATTCCGC ATTACGTGCT CGACTACGAA AGCCGCTTTC GCGAGTCGGT CATCGACAGC
TTTGCGGACA GCTACGCGCT GGGCGAAACG CCGGTGCCCT GCATCGAATG CAACCGCTCG
GTGAAGTTTC GCGACTTGCT GGCGACCGCG CGGGAGCTCG GCGCCTCGGC GCTCGCCACC
GGACACTATG TCTCGTCCCG GCGCCTCGAC GACGGATCGC GCGCATTGAT CTGCGCCGCC
GATCGCGATC GCGACCAGAG CTACTTCCTG TTCGCGACCA CCCGCGAGCA ACTCGATTTT
CTGCGCTTTC CACTCGGCGA CATGACCAAG CCGCAGACCC GTGAACTGGC GCGGCAGTTC
GGCCTGTCGG TCGCCGACAA GCACGACAGC CAGGACATCT GCTTCGTGCC GACCGGCCGC
TACACCGATG TGGTCGAGCG ACTGAAGCCG AACGCGATGG AGCCCGGCGA GATCGTCGAT
CTCAACGGCC ACGTGCTCGG CAGCCATCCC GGCATCGTGC ATTTCACCGT CGGCCAGCGC
CGCGGTCTCG GCATCGCCTC GCGGGCGCCG CTTTATGTGC TGCGGCTCGA TGCGGCGCAC
CGGCGCGTAG TGGTTGGCCC GCGCGAGGCG CTTCGGATGG AGCGGATCGT ACTGCGCGAC
GTCAACTGGA TCGGCGACGG CGCGATCGAT CAGGCGGTCG GCGACGGGCT GGAATTATTC
GTGCGGGTGC GCTCGACACG TGCGCCGCAG CCGGCCTGGC TGCGCGCCGT CGGAGGCGGC
TACGAGGTCG AGCTGGTCGC GGGCGAGGAG GGCGTTTCGC CCGGCCAGGC CTGTGTTTTC
TACGACGCGG CAGACGGGCA GGCGCGCGTG CTGGGTGGCG GCTTCATCAA GAGCGCTGCG
CCGCGGTGGA GCGCCGATGG AGTACGCGAC GACGCGGCTT CGCCTGCGCT GGCGGCGATG
CGCGGATAA
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| Protein sequence | MTESMLNSLD LEGRPQDTRV VVAMSGGVDS SATAALLKSQ GYDVVGITLQ LYDHGAATHR
KGACCAGQDI HDARAVAERI GIPHYVLDYE SRFRESVIDS FADSYALGET PVPCIECNRS
VKFRDLLATA RELGASALAT GHYVSSRRLD DGSRALICAA DRDRDQSYFL FATTREQLDF
LRFPLGDMTK PQTRELARQF GLSVADKHDS QDICFVPTGR YTDVVERLKP NAMEPGEIVD
LNGHVLGSHP GIVHFTVGQR RGLGIASRAP LYVLRLDAAH RRVVVGPREA LRMERIVLRD
VNWIGDGAID QAVGDGLELF VRVRSTRAPQ PAWLRAVGGG YEVELVAGEE GVSPGQACVF
YDAADGQARV LGGGFIKSAA PRWSADGVRD DAASPALAAM RG
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