Gene RPD_3958 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_3958 
Symbol 
ID4024474 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp4405733 
End bp4406221 
Gene Length489 bp 
Protein Length162 aa 
Translation table11 
GC content62% 
IMG OID637964160 
Producthypothetical protein 
Protein accessionYP_571078 
Protein GI91978419 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGCGGATAT GCTTGCTGCG CCATGCTGGG CGGATGGCTG GCATTCGCGT AATTCAGCTT 
CAGGAAATTC AACCCGCTTC GCCGCTTCAT CGGCCGTGGA TCAAAACCCG GCACCTCGGC
GATATCGTCG CGCGGATCGA TGCTGCGCTG GCGAAGACCC CGCGCCTCAG CTCCAATCGG
GCGATCCCTC CCGCGCCGAT CACTGTGGCG GCTGAGCCGA GCAGCAGCGC CGCTCTTTCT
TCAACCGACG GTGCAGAGGC ACTTCGACTG ACAGTGCACA ATTCGCGCCG CTGCGATCAC
GCCCCCGAAC TCCCTGCCCT TTTCTTCCTC CGGCGAGTGC CTTTGGACCG CTGGAAAGGT
AACTGGCTGA TCGGAATAAC TTGGATCGGC AACGACGAGC TGGACCTTCG GGTGACCAAC
CACAAGGCCA TCCGGAGCGG CGATCGCGCC ATTTTCGCCA TGGTTTCGAG CCATGCCACC
GGCCGTTAA
 
Protein sequence
MRICLLRHAG RMAGIRVIQL QEIQPASPLH RPWIKTRHLG DIVARIDAAL AKTPRLSSNR 
AIPPAPITVA AEPSSSAALS STDGAEALRL TVHNSRRCDH APELPALFFL RRVPLDRWKG
NWLIGITWIG NDELDLRVTN HKAIRSGDRA IFAMVSSHAT GR