Gene RPD_3957 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_3957 
Symbol 
ID4024473 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp4405407 
End bp4405649 
Gene Length243 bp 
Protein Length80 aa 
Translation table11 
GC content57% 
IMG OID637964159 
Producthypothetical protein 
Protein accessionYP_571077 
Protein GI91978418 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCCAGA TGCCTCAAAA CAAATGCAAA TCGCCGGAAT TTGCGCCCAG ATTTCCAATC 
ACTTCAGTTG GAGCATGTCA GCGGCTCGCC CGGACAGGCG TCGTTGTCAT CTGGCCGTAC
CAAGTGGGGG GCGATGTCGA GCACAAGCGC CGGCTGCTTT ACAACGCGGT CACGCGAGCG
AAGCGGTGGT GCAACATCAT CGTTCAAAGC CAGAATATTC TCGGGGCGGC GCCGTTTGCT
TAA
 
Protein sequence
MRQMPQNKCK SPEFAPRFPI TSVGACQRLA RTGVVVIWPY QVGGDVEHKR RLLYNAVTRA 
KRWCNIIVQS QNILGAAPFA