| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_3936 |
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| Symbol | |
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| ID | 4024452 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | + |
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| Start bp | 4375060 |
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| End bp | 4376091 |
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| Gene Length | 1032 bp |
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| Protein Length | 343 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637964140 |
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| Product | transposase IS116/IS110/IS902 |
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| Protein accession | YP_571058 |
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| Protein GI | 91978399 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG3547] Transposase and inactivated derivatives |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAGAAGA TTACCACAAT CGGACTAGAC TTGGCCAAGT CCGTCTTTCA GGTTCACGCA
GTTGCCGAAG ACGGTCGCGT CATGGTTCGT CGCGCGCTGC GGCGGTCGCA GTTATTGGAC
TTTTTTCGAT CGCTGGAACC GTGCCTCGTT GGCCTGGAGG CTTGCGCAAG TTCGCACTTT
TGGGCCAACG CTATTGGGCA ACTCGGTCAT ACAGTTAGGA TGATGCCGCC GGCCTACGTG
AAGGCCTATG TCAAACGCAA CAAAACAGAC GCCGCCGATG CCGAGGCGAT CTGTGAGGCG
GTGACGCGAC CGACTATGCG CTTCGTGCCG ATCAAATCGC CGGAAGAGCA GGCGGCGGGA
ATGGTCCTGA AGACACGGGA GCTGTTTGTG CGTCAGCGGA GCCAGACGGC GAACGCGATG
CGCGCTCACA TGGCCGAGTT GGGCATCGTA GCCGCAACCG GAATGACCAG CATCGCCAAA
CTCGTCGCCA TTCTCCGTGG CGGTGACGAT GACCGCCTTC CATCTGCAGC TCGAGCAGCC
CTCCTGGAGA TGGCCGAGCA GATCGAGAGA CTGACGGCCC GTATCGAAGC GCTCGACACG
AAAATCATGG CGGCGGTGAA GAATGACGAA GCCGCTCGAC GGCTCACCAC CATCCCCGGC
GTCGGTCCGA TCATCGCCGC GACGGTCCGG GCAACGATCC AGGATCCAGC AGCCTTCCGA
ACGGGACGCG ATCTGGCGGC TTGGATCGGG ATTACACCGA GGGCCAACTC CAGCGGCGGC
AAAGAGCGGC TCGGCCGAAT ATCGAAGCAA GGCAACAAGC AGTTGCGAAC GCTGCTCATC
GTCGGCGCGA CGTCGATTCT GAAGCAGGCA AGTCGTGGCG TGAATCTGCC CGCCTGGGTG
TTATCCTTGA TGGTGCGTCG GCCCTACAAG GTTGCAGCCG TGGCGCTGGC CAACAAGATG
GCGCGCACGA TCTGGGCGCT TCTCGTCAAG GGCGGAACTT ACCAGGCGCC AGCAATCATG
GCGCGAGCAT AG
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| Protein sequence | MEKITTIGLD LAKSVFQVHA VAEDGRVMVR RALRRSQLLD FFRSLEPCLV GLEACASSHF
WANAIGQLGH TVRMMPPAYV KAYVKRNKTD AADAEAICEA VTRPTMRFVP IKSPEEQAAG
MVLKTRELFV RQRSQTANAM RAHMAELGIV AATGMTSIAK LVAILRGGDD DRLPSAARAA
LLEMAEQIER LTARIEALDT KIMAAVKNDE AARRLTTIPG VGPIIAATVR ATIQDPAAFR
TGRDLAAWIG ITPRANSSGG KERLGRISKQ GNKQLRTLLI VGATSILKQA SRGVNLPAWV
LSLMVRRPYK VAAVALANKM ARTIWALLVK GGTYQAPAIM ARA
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