| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_3928 |
|---|
| Symbol | |
|---|
| ID | 4024444 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris BisB5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007958 |
|---|
| Strand | + |
|---|
| Start bp | 4367125 |
|---|
| End bp | 4368288 |
|---|
| Gene Length | 1164 bp |
|---|
| Protein Length | 387 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 637964132 |
|---|
| Product | glucose sorbosone dehydrogenase |
|---|
| Protein accession | YP_571050 |
|---|
| Protein GI | 91978391 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG2133] Glucose/sorbosone dehydrogenases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGACAC TTCTGGTCTG GGTCTCCGGC ACGCTGACCG CGGCGACGGT GATCATTGCA
TCGTCCCTGA TCGCGACGAA AAGCAGCGGC CAACCGACCT CGTTCGGCTC GTCCGCAGGC
GCGCTCGATG TGAAGACGTT CGCGCAGAAT CTCGTCAATC CCTGGGCTTT GGCCTTTCTG
CCAGAGGGGC GCGTGCTGGT CACCGAGAAG CCGGGACGAA TGCGCGTGGT GTCGGCGCAG
GGAGCGCTGT CAACGCCGTT GAAAGGCGTT CCCGAGGTCT GGCCCGCAGG CCAGGGCGGC
CTGCTCGACG TTGCCACCGA CAAGGACTTC GCCGGCAACA AGACGATCTA TCTCTGTTAC
GCCGAGCGCA CCGGCAATGG CGGCCGCACG GCGGTTGCGC GCGCCGCCCT GGTCGACGGC
GACGCGCCCC GTCTCGACGC TGTCGAGGTG ATCTTTCGCC AGGACGGCCC GCTGTCGCCG
GGCAATCACT ATGGCTGCCG GATCGCACAG GGCGCCGACG GCAATCTGTT CGTCTCCCTC
GGCGATCACT TCGCCCATCG CGACGAGGCG CAGAACCTCG GCAATCATCT CGGCAAGATC
ATTCGCATCG CGCCGGACGG CAGCGTGCCC AAGGATAATC CGTTCGTTGG CCGCGCCGAC
GCCAAGCCGG AGATCTGGAG CTACGGCCAC CGCAACGCGC AGGCGCTCGC CATCAATCCC
GCCAACGGCC AATTGTGGGA GATCGAGCAC GGCCCGCGCG GCGGCGACGA AGTCAACATG
ATCGGCCCCG GCAAGAACTA CGGCTGGCCG GTGATCGGCT ACGGCATCGA TTACAGCGGC
GCCAAAATCC ACGACAGCAC GTCGAAGCCC GGCATGGAGC AGCCGATCAA ATATTGGGTT
CCGTCGATCG CGCCGTCCGG CATGGCGTTC TACACAGCCA AGCTGTTTCC GAAGTGGGAC
GGCAGCCTGT TCACCGGCGC CCTCGCCGGC AAGATGCTGG TGCGGCTGTC GCTCTCTGGC
GACAAGGTGA CCGGCGAGGA ACGTCTGCTG CTGGCGCTGA ACGAACGCAT CCGCGACGTC
CGCCAGGGCC CTGACGGCGC GCTATGGCTG CTCACCGACA ACGCCGCGGG CCGCATCCTG
CGCGTGACGC CGACGGGCGA GTGA
|
|---|
| Protein sequence | MKTLLVWVSG TLTAATVIIA SSLIATKSSG QPTSFGSSAG ALDVKTFAQN LVNPWALAFL
PEGRVLVTEK PGRMRVVSAQ GALSTPLKGV PEVWPAGQGG LLDVATDKDF AGNKTIYLCY
AERTGNGGRT AVARAALVDG DAPRLDAVEV IFRQDGPLSP GNHYGCRIAQ GADGNLFVSL
GDHFAHRDEA QNLGNHLGKI IRIAPDGSVP KDNPFVGRAD AKPEIWSYGH RNAQALAINP
ANGQLWEIEH GPRGGDEVNM IGPGKNYGWP VIGYGIDYSG AKIHDSTSKP GMEQPIKYWV
PSIAPSGMAF YTAKLFPKWD GSLFTGALAG KMLVRLSLSG DKVTGEERLL LALNERIRDV
RQGPDGALWL LTDNAAGRIL RVTPTGE
|
|---|
| |