| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_3925 |
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| Symbol | |
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| ID | 4024441 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | - |
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| Start bp | 4364397 |
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| End bp | 4365599 |
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| Gene Length | 1203 bp |
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| Protein Length | 400 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637964129 |
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| Product | aspartate aminotransferase |
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| Protein accession | YP_571047 |
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| Protein GI | 91978388 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0436] Aspartate/tyrosine/aromatic aminotransferase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.0454577 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGTTCC TGTCCGCCTC GCTCGATCGT GTGAAGCCGT CCGCGACGAT CGCGGTCACG
GATAAGGCAC GTGAGCTGAA AGCAGCGGGC CGCAACGTCA TCGGGCTCGG CTCCGGCGAG
CCGGATTTCG ACACCCCGGC CAACATCAAG CTGGCGGCGA TTCATGCCAT CGAGGCCGGC
AAGACCAAGT ACACCGCGGT CGACGGCATT CCGGAGCTGA AGCAGGCGAT CATCGACAAG
TTTCAGCGCG AGAATGGCCT GACCTACAAG CCGAACCAGA TCATCGTCGG CACCGGCGGC
AAGCAGGTGC TGTACAACGC GCTGATGGCG ACCATCAATC CGGGCGACGA GGTGATCATC
CCGGCGCCCT ATTGGGTCAG CTATCCCGAG ATGGTGGCGC TTGCCGGTGG CGAGTCGGTG
CCGGTGGTGT GCCCGGCGGA GTCCGGCTTC AAGCTGCAGC CGGCGGCGCT GGAAGCGGCG
ATTACGCCGA AGACCAAGTG GATCATCCTG AATTCGCCGT CGAATCCGAC CGGCGCCGCC
TACACGCGCG ACGAGTTGAA GGCGCTGACC GACGTGCTGG TCAAGCATCC TCATGTCTGG
GTGATGACCG ACGACATGTA CGAGCATCTC GTCTACGACG ATTTCACCTT CACCACGCCG
GCGCAGATCG AGCCGAAGCT GTTCGATCGC ACGCTGACGG TGAACGGCGT CTCCAAAGCC
TATTGCATGA CCGGCTGGCG GATCGGCTAT GCCGGCGGCC CGGCGCAGTT GATCAAGGCG
ATGTCGACGA TCCAGTCGCA ATCGACTTCG AACCCGTCGT CGATCGCGCA GTGGGCCGCG
GTCGAAGCCT TGAACGGGCC GCAGGAATTC ATCGCGGCAC ACAACACCGT GTTCAAGGAG
CGTCGCGATC TCGTTGTGTC GATGCTGAAC CAGGCCCAGG GCATCGACTG CCCGCGGCCG
GAAGGCGCGT TCTACGTCTA TCCGTCCTGC GCCGGCACGA TCGGCAAGAC CGCGCCGTCG
GGCAAGAAGA TCGAGAACGA CCAGGATTTC GTCACCGAGT TGCTCGAAGC CGAAGGCGTT
GCGGTGGTGC AGGGCTCGGC GTTCGGTCTC GGCCCGGCGT TCCGAATCTC CTACGCGACC
AAAACCTCGG ACCTCGAAGA CGCCTGCAAG CGGATCCAGC GCTTCTGCGG CAATCTGCGC
TGA
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| Protein sequence | MSFLSASLDR VKPSATIAVT DKARELKAAG RNVIGLGSGE PDFDTPANIK LAAIHAIEAG
KTKYTAVDGI PELKQAIIDK FQRENGLTYK PNQIIVGTGG KQVLYNALMA TINPGDEVII
PAPYWVSYPE MVALAGGESV PVVCPAESGF KLQPAALEAA ITPKTKWIIL NSPSNPTGAA
YTRDELKALT DVLVKHPHVW VMTDDMYEHL VYDDFTFTTP AQIEPKLFDR TLTVNGVSKA
YCMTGWRIGY AGGPAQLIKA MSTIQSQSTS NPSSIAQWAA VEALNGPQEF IAAHNTVFKE
RRDLVVSMLN QAQGIDCPRP EGAFYVYPSC AGTIGKTAPS GKKIENDQDF VTELLEAEGV
AVVQGSAFGL GPAFRISYAT KTSDLEDACK RIQRFCGNLR
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