| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_3919 |
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| Symbol | |
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| ID | 4024435 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | - |
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| Start bp | 4358856 |
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| End bp | 4359707 |
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| Gene Length | 852 bp |
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| Protein Length | 283 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 637964123 |
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| Product | shikimate 5-dehydrogenase |
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| Protein accession | YP_571041 |
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| Protein GI | 91978382 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0169] Shikimate 5-dehydrogenase |
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| TIGRFAM ID | [TIGR00507] shikimate 5-dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGACTCAGC CGACAAGCCA AGCCCATATT GCCGCCTGCC TGATCGGCTG GCCGGCGGCG
CATTCGCGCT CGCCCCTGAT CCATCATTAC TGGCTGCGCA AGCTCGGGAT CGAAGGCGGC
TATTCGATCG AGTCGGTGCC GCCCGAAGGT TTTGCCGAAT TCGTGCTGCA TCTGAAGACG
CACGGCTACA GCGGCGCCAA CGTCACCATC CCGCACAAGG AACGCGCGCT GCAGCTCACT
GTGCCGGACC AGCGCGCCTG CGCGGTCGGC GCCGCCAACA CGCTGTACTA CGACGGTTCT
GTGCTGCGCT CGACCAACAC CGACGTCGAA GGCTTCATCA GTAATCTCGA CGCCAGCGCG
CCGGGCTGGG ATCGCACACC ACATGCCGTC GTGCTCGGCG CCGGCGGTTC GTCGCGCGCG
GTGGTGTTCG GCCTGCTGGA GCGCGGCATC CAGCGCATCG CGCTGGCAAA CCGCTCGATC
GAACGCGCGC GGGCGCTGGC CGACCTGTTC GGCGAGCGCG TCGTGCCGAT CGCCTGGACC
GATGCGCCCG CGGCGCTGCC GGGCGCGGGG CTTCTGGTCA ACACCACCTC GCTCGGCATG
AAGGGGCAGC CGTCACTCGA CCTCGATCTC GAGCCGCTGC CGGCCGACGC CACCGTCGCC
GATCTGGTCT ATGTGCCGCT CGAGACCGAG CTGTTGTCAG AGGCGCGCGC CCGCGGTCTG
CGCACCGCTG ACGGCCTCGG CATGTTGCTG CATCAGGCGG TGCGCGGGTT CGAACTGTGG
TTCGGCGCGC GGCCCGAAGT CACGTCCGAA CTGCGCGCGC TGGTCGAGGC CGATCTCGTC
GCCCATGCGT GA
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| Protein sequence | MTQPTSQAHI AACLIGWPAA HSRSPLIHHY WLRKLGIEGG YSIESVPPEG FAEFVLHLKT
HGYSGANVTI PHKERALQLT VPDQRACAVG AANTLYYDGS VLRSTNTDVE GFISNLDASA
PGWDRTPHAV VLGAGGSSRA VVFGLLERGI QRIALANRSI ERARALADLF GERVVPIAWT
DAPAALPGAG LLVNTTSLGM KGQPSLDLDL EPLPADATVA DLVYVPLETE LLSEARARGL
RTADGLGMLL HQAVRGFELW FGARPEVTSE LRALVEADLV AHA
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