Gene RPD_3917 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_3917 
Symbol 
ID4024433 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp4357187 
End bp4358002 
Gene Length816 bp 
Protein Length271 aa 
Translation table11 
GC content66% 
IMG OID637964121 
Productenoyl-CoA hydratase/isomerase 
Protein accessionYP_571039 
Protein GI91978380 
COG category[I] Lipid transport and metabolism 
COG ID[COG1024] Enoyl-CoA hydratase/carnithine racemase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGGGA CCAAACGCGC GACAGAAGCC GCGGCGAGCG AAGTGCTCTA CGCCGTCGAG 
GATCACATCG CGACCATCAC GCTGAATGCG CCGGAGCGGA TGAACACCAT CTCCGGTCCG
ATGCTGAACG ATCTGGCGCG GCTTTTGGTC GAGGCCAATC AGGATCCGCA GGTGCGCTGC
GTGATCCTGA CCGGCAATGG CCGCGCGTTC TGCGCCGGCC TCGATCTGCG CAAGACGCGG
AGCGAGGACG GCCTCAGCGA AGCGTCGTCG CCGACCTCGC TCGATCTGCG CAACACCCCG
CCGACCGTGA TGCAGGCGAT GGACAAGCCG ACGATCTGCG CGGTCAACGG CGGCGCGGCC
GGCTACGGCA TGGACACCGC GCTCGGCTGC GACATCCGGA TCATGGCGGA ATCGGCCAAG
CTCGCCGCAG CTTTCGTCAA GCGCGGCGTG GTGCCGGAAT CCGGCGGCAC CTGGTTTCTG
CCGCGGATGA TCGGCTGGTC GAAAGCCGCC GAACTGATCT TCACCGGGCG GACGCTGTCG
GCGCGCGAAT GCCTCGATTG GGGGCTCGCC AACGAGGTGG TGCCTGACGC CGAGCTGATG
GGCCGCGCCC GCGCAGTCGC GAAGGAGATC GCCGGCAACG CGCCGCTCGC GGTGCAGGCC
GCCAAACGGA TGATGCGGAT GGGCCTCAAC GAGACCTTCC CCGACCACGT CCACCACGTC
TATCTGCAGC TGCTGCCGCT GTTCAAGACA CAGGACATGG CCGAAGGCAT CAAGGCCTTC
ATGGAAAAGC GCGAACCGAA ATTCGAAGGG CGCTAG
 
Protein sequence
MTGTKRATEA AASEVLYAVE DHIATITLNA PERMNTISGP MLNDLARLLV EANQDPQVRC 
VILTGNGRAF CAGLDLRKTR SEDGLSEASS PTSLDLRNTP PTVMQAMDKP TICAVNGGAA
GYGMDTALGC DIRIMAESAK LAAAFVKRGV VPESGGTWFL PRMIGWSKAA ELIFTGRTLS
ARECLDWGLA NEVVPDAELM GRARAVAKEI AGNAPLAVQA AKRMMRMGLN ETFPDHVHHV
YLQLLPLFKT QDMAEGIKAF MEKREPKFEG R