Gene RPD_3914 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_3914 
SymbolglmM 
ID4024430 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp4353999 
End bp4355351 
Gene Length1353 bp 
Protein Length450 aa 
Translation table11 
GC content66% 
IMG OID637964118 
Productphosphoglucosamine mutase 
Protein accessionYP_571036 
Protein GI91978377 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1109] Phosphomannomutase 
TIGRFAM ID[TIGR01455] phosphoglucosamine mutase 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCCGCA GATATTTCGG GACCGACGGG ATTCGTGGCC GCGCCAACGG CCTGATCACG 
CCTGAGCTGG CGTTGAAGGT TGGGCAGGCG GCAGGTTTGG TGTTTCAGCG CGGCGACCAC
CGGCACCGTG TGGTGATCGG CAAGGACACC CGGCTGTCCG GCTATATGAT TGAAAACGCG
ATGGTCGCCG GCTTCACCTC GGTCGGCATG GACGTGCTGC TGGTCGGCCC GATGCCGACC
CCGGCGGTTG CGATGCTGAC CAAGTCGATG CGCGCCGATC TCGGCGTGAT GATTTCCGCG
TCGCACAATA TGTTCGAGGA CAACGGCATC AAGCTGTTCG GTCCGCTCGG CTTCAAGCTT
TCCGACGACG TCGAGAAGCA GATCGAGCTG CTGCTCGACG AGTCGCTCGA CAAGAAACTG
GCTGCGAGCG CCAGCCTTGG CCGGGCTCGC CGGATCGACG GCGTCCACGA TCGCTACATC
GAATTCGCCA AGCGGACGCT GCCGCGCGAC CTCAGTCTCG ACGGCCTGCG CGTCGTGGTC
GATTGCGCCA ATGGCGCGGC CTACAAGGTC GTGCCCGAGG CGCTGTGGGA ACTCGGCGCC
GACGTGATTT CGATCGGCGT CGAACCCGAC GGCTTCAACA TCAACAAGGA ATGCGGTTCG
ACCGCGCCGG AAGCGCTGTG CCGCAAGGTC CGCGAGATGC GCGCCGACAT CGGCATCGCA
CTCGACGGCG ACGCCGACCG TGTCATCATG GTCGACGAGC GCGGCCATGT CGTCGACGGC
GACCAGTTGC TGGCGGTGAT CGCGCAGAGC TGGAAGGAAG ACGGCCGGCT CGCCAAGCCC
GGCGTCGTCG CCACCGTGAT GTCCAATCTC GGCCTCGAGC GCTTTCTCGC CGCCGAAGGC
ATCGATCTGG TGCGCACGTC GGTCGGCGAC CGCTACGTGC TCGAGCAGAT GATGAAGGGG
GGCTACAATG TCGGCGGCGA GGCGTCGGGC CACATCATCC TGTCCGATTA CAACACGACC
GGCGACGGCT TCGTCGCGGC GCTGCAGGTA CTCGCGGTGG TGCAGAAGCT GCGCCGCCCG
GTGTCCGAGG TTTGCCACCG CTTCGACCCG CTGCCGCAGA TCCTCAAGAA CGTCCGCTAT
CGCAATGGCC GTCCGCTCGA CGACGCCGGG GTGCAATCGG CGATTCACGC CGGCGAGACA
AGGCTCAACG GCCACGGCCG CCTGCTGATC CGGGCGTCCG GCACCGAGCC GGTGATCCGG
GTGATGGGCG AGGGCGAAGA TCGCATCATG GTCGAGGAAG TGGTTGACGT CATCGTCGAC
GCGCTCGGCA GCGCCTCCGC CGCCGCCGCG TAG
 
Protein sequence
MSRRYFGTDG IRGRANGLIT PELALKVGQA AGLVFQRGDH RHRVVIGKDT RLSGYMIENA 
MVAGFTSVGM DVLLVGPMPT PAVAMLTKSM RADLGVMISA SHNMFEDNGI KLFGPLGFKL
SDDVEKQIEL LLDESLDKKL AASASLGRAR RIDGVHDRYI EFAKRTLPRD LSLDGLRVVV
DCANGAAYKV VPEALWELGA DVISIGVEPD GFNINKECGS TAPEALCRKV REMRADIGIA
LDGDADRVIM VDERGHVVDG DQLLAVIAQS WKEDGRLAKP GVVATVMSNL GLERFLAAEG
IDLVRTSVGD RYVLEQMMKG GYNVGGEASG HIILSDYNTT GDGFVAALQV LAVVQKLRRP
VSEVCHRFDP LPQILKNVRY RNGRPLDDAG VQSAIHAGET RLNGHGRLLI RASGTEPVIR
VMGEGEDRIM VEEVVDVIVD ALGSASAAAA