| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_3905 |
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| Symbol | |
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| ID | 4024421 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | - |
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| Start bp | 4344160 |
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| End bp | 4345749 |
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| Gene Length | 1590 bp |
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| Protein Length | 529 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637964109 |
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| Product | D-3-phosphoglycerate dehydrogenase |
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| Protein accession | YP_571027 |
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| Protein GI | 91978368 |
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| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
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| COG ID | [COG0111] Phosphoglycerate dehydrogenase and related dehydrogenases |
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| TIGRFAM ID | [TIGR01327] D-3-phosphoglycerate dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGCAC CCAAAGTCCT CATTTCCGAC GCGCTGTCGG AAGCCGCCGT TCAGATCTTC
AAGGATCGCG GCATCGACGT CGATTTCCAG CCGAACCTCG GCAAGGACAA AGAGAAGCTC
GCCGAGATCA TCGGCAATTA CGATGGCCTC GCGATCCGCT CGGCCACCAA GGCCACCGCG
AAGATCCTCG AGAAGGCCGC GAAGCTCAAG GTGATCGGCC GCGCCGGCAT CGGTGTCGAC
AACGTCGAGA TTCCGGCTGC GACCGCCAAG GGCGTGATCG TGATGAACAC GCCGTTCGGC
AATTCGATCA CCACCGCCGA GCACGCCATC ACCATGATGC TGTCGCTGGC GCGTGAGATC
CCGGCGGCCG ACGCCTCGAC CCAGGCCGGC AAGTGGGAGA AGAACCGCTT CATGGGCGTC
GAGATCACCG CCAAGACGCT CGGCGTGATC GGCTGCGGCA ATATCGGCTC GATCGTCGCC
GACCGCGCGC TCGGCCTGAA GATGAAGGTG ATCGCGTTCG ACCCGTTCCT GTCGCCGGAG
CGTGCCCGGG ATCTCGGCGT CGAGAAGGTT GAACTGGAAG ACCTGTTCAA GCGCGCCGAC
TTCATCACGC TGCACACCCC GCTCACCGAC AAGACCAAGA ACATCATCGA CGCGGCTGCG
ATCGCCAAGA TGAAGAAGGG CGTCCGCATC ATCAATTGCG CCCGCGGCGG TCTGGTCGAC
GAGCAGGCGC TCGCCGAGGC GCTGAAGTCG AAGCAGGTCG CCGGCGCCGC TTTCGACGTG
TTCTCCGAGG AGCCGGCCAC GACCAACGTT CTGTTCGGCC TGCCCAACGT GATCTGCACC
CCGCATCTCG GTGCCTCGAC CACTGAAGCG CAGGAGAACG TCGCGCTGCA GGTCGCCGAG
CAGATGTCCG ACTATCTGCT CAGCGGCGCG ATCACCAACG CCGTCAACTT CCCGTCGATC
ACCGCCGAAG AAGCGCCGAA GCTGAAGCCT TTCATCGAAC TCGCCGAAAA GCTCGGCTCG
TTCGCCGGCC AGCTCACCGA CAGCGGCATC ACCAAGGTCA CCATCACCTA TGAGGGCCAT
GTCGCCGAGA TGAAGATCAA GGCGCTGACC TCGGCGGTGC TGTCGGGCCT GCTGCGGCCG
ATGCTGGGCG ACATCAACGT CGTCTCCGCG CCGGTGATCG CCAAGGAGCG CGGCATGGTG
GTGGACGAAG TCGTCCGCGC CGCCGAGAGC GACTATGAGA GCCTGATCAC GCTGAAGGTC
GCGACCGAAA AGCAGGAGCG CTCGGTGTCC GGCACGGTCT ATGCCGACGG CAAGCCGCGG
CTGGTCGACA TCAAGGGCAT CCGCGTCGAC GCCGAGTTCG GCAAATCGAT GATCTACGTC
ACCAACGAGG ACAAGCCGGG CTTCATCGGC AAGTTCGCGA GCCTGCTCGG TGATGCGAAG
GTCAACATCG CGACCTTCAA CCTCGGCCGC CACAGCCAGG GCGGCGACGC CATCGCGCTG
GTCGAGGTCG ACGGTCCGGT GCCGGCCGAG GTGATCGCCC AGGTCCAGGC GCTGCCGCCG
GTCAAGCAGG CCAAAGCGCT GGTGTTCTGA
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| Protein sequence | MTAPKVLISD ALSEAAVQIF KDRGIDVDFQ PNLGKDKEKL AEIIGNYDGL AIRSATKATA
KILEKAAKLK VIGRAGIGVD NVEIPAATAK GVIVMNTPFG NSITTAEHAI TMMLSLAREI
PAADASTQAG KWEKNRFMGV EITAKTLGVI GCGNIGSIVA DRALGLKMKV IAFDPFLSPE
RARDLGVEKV ELEDLFKRAD FITLHTPLTD KTKNIIDAAA IAKMKKGVRI INCARGGLVD
EQALAEALKS KQVAGAAFDV FSEEPATTNV LFGLPNVICT PHLGASTTEA QENVALQVAE
QMSDYLLSGA ITNAVNFPSI TAEEAPKLKP FIELAEKLGS FAGQLTDSGI TKVTITYEGH
VAEMKIKALT SAVLSGLLRP MLGDINVVSA PVIAKERGMV VDEVVRAAES DYESLITLKV
ATEKQERSVS GTVYADGKPR LVDIKGIRVD AEFGKSMIYV TNEDKPGFIG KFASLLGDAK
VNIATFNLGR HSQGGDAIAL VEVDGPVPAE VIAQVQALPP VKQAKALVF
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