Gene RPD_3898 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_3898 
Symbol 
ID4024414 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp4335788 
End bp4336222 
Gene Length435 bp 
Protein Length144 aa 
Translation table11 
GC content62% 
IMG OID637964102 
Producthypothetical protein 
Protein accessionYP_571020 
Protein GI91978361 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGCATCG AGCATCTGAA TATCGAGGGG TTGAAGGAGC TGGAGCGCGA GGATCGCGGG 
CCGGTGGTGA TGGTCAATTT GATGCGGTTC AACGAAAGCG GGGGCGACGG CGACGCCTCC
GGCTGGGACG CCTATCTGCG CTACAGCACG CTCACTGTGC CGATGATCAA GGCGCGCGGT
GGCACGCTGT TATGGACCGG CACCGCCAAG GCGATCGCCC TCGGCCGCGA CGACGGCCGG
CATTGGGACT ATCTGGCGCT GGTGTATTAC CCGTCGATCG AGGCGTTTCT CGACATGATG
AACTCGGCCG AATACGAACT CGAATGCGAT CCGCATCGCC GCGCCGCCTG CGCCGACCAT
CTGATCATCT GCACGCGCGA ATCGTACAGC AAGTTCGGTA TCTCCTCACC GCGGCAGGAT
ACCCTTTCGG AGTAG
 
Protein sequence
MGIEHLNIEG LKELEREDRG PVVMVNLMRF NESGGDGDAS GWDAYLRYST LTVPMIKARG 
GTLLWTGTAK AIALGRDDGR HWDYLALVYY PSIEAFLDMM NSAEYELECD PHRRAACADH
LIICTRESYS KFGISSPRQD TLSE