| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_3886 |
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| Symbol | |
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| ID | 4024402 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | + |
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| Start bp | 4324877 |
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| End bp | 4325989 |
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| Gene Length | 1113 bp |
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| Protein Length | 370 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637964090 |
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| Product | branched-chain amino acid aminotransferase |
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| Protein accession | YP_571008 |
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| Protein GI | 91978349 |
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| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
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| COG ID | [COG0115] Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase |
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| TIGRFAM ID | [TIGR01123] branched-chain amino acid aminotransferase, group II |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.184711 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGAATCT CGTTCGACGC GGTCGACGGC TCGGTCTGGC TGAATTTCGA CATCCAGCCC
GCTGCAAATC CGACGTCCGC AACGGATCGC ACGGCAAAGC TCGCCAATCC GGGCTTCGGC
CGGGTGTTTA CCGATCACAT GGCGATCGTC CGCTACGACC AGGCCAAGGG CTGGCATGGC
GCGCGGATCG AGGCCCGGGC GAATTTCCCG CTCGATCCGG CCACCGCCGT GCTGCACTAC
GCGCAGGAGA TCTTCGAGGG CCTCAAGGCC TATAAGCGCG ACGACGGCGG CGTGAACCTG
TTCCGCCCCG ACGCCAATGC GCGGCGCTTC CGCAATTCGG CCGACCGCAT GGCGATGGCG
CAGCTGCCCG AGCCGGTGTT CATCGAGGCG GTCGAACAGC TGGTGCGCGC CGACCGCGAC
TGGATTCCCG GCGGCGAAGG CAGCCTCTAT CTGCGCCCCT TCATGATCGC CAACGAGGTC
TTCCTCGGCG TCAAGCCGTC GGCGGAATAC ATCTTCGCGG TGATCGCGTC GCCGGTCGGC
TCCTACTTCA AAGGCGGGCC CGCGCCGGTG TCGATCTGGG TGTCGGAAAA CTACACCCGC
GCCGCGATCG GCGGCACCGG CAGCGTCAAA TGCGGCGGCA ACTACGCAGC CAGCCTGCGC
GCGCAGGCCG AGGCGATCGA GCGCGGTTGC GATCAGGTGG TGTTCCTGGA TGCGCTCGAG
CGGCGTTACA TCGAGGAGCT CGGCGGCATG AACGTGTTCT TCGTGTTCGA CGACGGCTCG
CTGTCGACTC CGCCGCTCGG CACCATTCTG CCCGGCATCA CCCGCGACTC GATCATCGCG
CTGGCGAAGG CGTCGGGCGC ACAGGTGCGC GAGGAGCCCT ACACCATCCA GCAATGGCGC
GCCGACGCCG CCAGCGGCAG GCTGAAAGAG GCCTTCGCCT GCGGCACGGC CGCGGTGATC
TCGCCGATCG GCCAGGTGCG CTCGGCCAGC GGCGATTTCA GCATCAATGG CGGCGCCGCC
GGCCCGGTCG CGATGGGATT GCGCAAGCAG CTCGTCGACA TCCAGTACGG CCGCGCGCCC
GATCCGCACA ACTGGATCAG GAACGTCGCG TAG
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| Protein sequence | MGISFDAVDG SVWLNFDIQP AANPTSATDR TAKLANPGFG RVFTDHMAIV RYDQAKGWHG
ARIEARANFP LDPATAVLHY AQEIFEGLKA YKRDDGGVNL FRPDANARRF RNSADRMAMA
QLPEPVFIEA VEQLVRADRD WIPGGEGSLY LRPFMIANEV FLGVKPSAEY IFAVIASPVG
SYFKGGPAPV SIWVSENYTR AAIGGTGSVK CGGNYAASLR AQAEAIERGC DQVVFLDALE
RRYIEELGGM NVFFVFDDGS LSTPPLGTIL PGITRDSIIA LAKASGAQVR EEPYTIQQWR
ADAASGRLKE AFACGTAAVI SPIGQVRSAS GDFSINGGAA GPVAMGLRKQ LVDIQYGRAP
DPHNWIRNVA
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