| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_3881 |
|---|
| Symbol | |
|---|
| ID | 4024397 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris BisB5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007958 |
|---|
| Strand | + |
|---|
| Start bp | 4320402 |
|---|
| End bp | 4320941 |
|---|
| Gene Length | 540 bp |
|---|
| Protein Length | 179 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 637964085 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_571003 |
|---|
| Protein GI | 91978344 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG5465] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.832488 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGTATCA GGCACATCCA AACTGAAAGT CGAGACGGCA TGGCCATGCT CGAAGGCATC
TTCGATTCCC CGAACAACCC GCTCGCGGCG GTCGAAGACA TCGCGGCGTC GAACGATCTG
GTGTTCGAGC GATCCGGCGA AGACGAAATC ACCATCACGG CGAAAGGGCA GTGGACCGAT
TATACGCTGT CTTTCACCTG GATGAGCGAG ATCGAGGCGC TGCATCTGGC CTGCGCCTTC
GATATGAAGG TCCCCTCCGC GCGGCGCGGC GAAACCCAGC GGTTGATCGC GGCGATCAAC
GAGCAGCTCT GGGTCGGACA CTTCGATATA TGGACACAAA CCGGTACGAT CATGTACCGG
CAGGCGCTGG TGCTGCCGGG CGGTTTGTCG GCGACCAACG CGCAGTGCGA GACCATGCTG
ATCAGCGCGA TCCACGCCTG CGAGCGCTAC TATCCGGCGA TCCAGTTCAC GGTGTGGGCC
GGCAAGACGG CAGCCGAGGC GATGTCTGCT GCGATGTTCG ACACCGAAGG CGAAGCCTGA
|
|---|
| Protein sequence | MRIRHIQTES RDGMAMLEGI FDSPNNPLAA VEDIAASNDL VFERSGEDEI TITAKGQWTD
YTLSFTWMSE IEALHLACAF DMKVPSARRG ETQRLIAAIN EQLWVGHFDI WTQTGTIMYR
QALVLPGGLS ATNAQCETML ISAIHACERY YPAIQFTVWA GKTAAEAMSA AMFDTEGEA
|
|---|
| |