| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_3863 |
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| Symbol | |
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| ID | 4024379 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | - |
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| Start bp | 4301371 |
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| End bp | 4302297 |
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| Gene Length | 927 bp |
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| Protein Length | 308 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637964067 |
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| Product | inner-membrane translocator |
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| Protein accession | YP_570985 |
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| Protein GI | 91978326 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0559] Branched-chain amino acid ABC-type transport system, permease components |
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| TIGRFAM ID | [TIGR03409] urea ABC transporter, permease protein UrtB |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.343461 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTCGGCG ATTATTCCAT TGGCGATCTC GGCGCGATCT TTGCGATGCA GGGCTTCGCG
GGCCTGATCC TGTTCTCGGT CTACCTGCTG ATGGCGCTCG GCCTCGCCAT CATCTTCGGC
CAGATGGGCG TCATCAATAT GGCCCATGGC GAGTTCATGA TCCTCGGCGC CTACGTCACG
TGGATGACGT CGAACGCATT TCAGGCCTAT CTGCCGTCGC TGTTTCCCGG CTACTTCTTC
GTTGCGATGA TCCTCGCATT CATCGCCTCC GGTGCGCTCG GCATGCTGGT CGAATGGGGG
TTGATCAGAC ACCTCTACAG GCGGCCGCTC GATACGCTGC TCGCGACCTG GGGGTTGTCG
CTGATCCTGC AGCAGGCCTA TCGCTCGATC TTCGGCGCCC GTGAAGTCGG CGTCGAGTTG
CCGCAATGGA TGCTCGGCTC CAAGCAGATC ACCGACACCA TCGAAGTGCC GATCAACGGC
ATCTTCGTGA TGTGCCTCAC CGTACTGATC ACCGCGACCG TCGCCTATGT GATGTACAAG
TCGCGCTGGG GCCGCCAGGT CCGCGCCGTG GTGCAGAACC GGGTGATGGC CGGCGCGGTC
GGCATCAACA CCGAGAAGGT CGACCGCACC ACCTTCGGTC TCGGCTGCGG CATCGCCGGC
ATCGCGGGAA GCGCCTTCAC CATGATCGGC TCGACCGGGC CGACCTCGGG TCAGCTTTAC
ATCGTCGACA CCTTCCTCGT CGTTGTGTTC GGCGGCGCGG CCAGCCTGTT CGGTACCATC
GCTTCGGCCT TCAGCATCTC GCAGGCGCAG TCGACCATGG AGTTCTTCAT GTCCGGCTCA
ATGGCCAAGG TGCTGACCCT GCTCGCCATC GTCGCGATCC TGATGATGCG CCCGCAAGGC
CTGTTCGCTC TCAAGGTTCG CAAGTAA
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| Protein sequence | MFGDYSIGDL GAIFAMQGFA GLILFSVYLL MALGLAIIFG QMGVINMAHG EFMILGAYVT
WMTSNAFQAY LPSLFPGYFF VAMILAFIAS GALGMLVEWG LIRHLYRRPL DTLLATWGLS
LILQQAYRSI FGAREVGVEL PQWMLGSKQI TDTIEVPING IFVMCLTVLI TATVAYVMYK
SRWGRQVRAV VQNRVMAGAV GINTEKVDRT TFGLGCGIAG IAGSAFTMIG STGPTSGQLY
IVDTFLVVVF GGAASLFGTI ASAFSISQAQ STMEFFMSGS MAKVLTLLAI VAILMMRPQG
LFALKVRK
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