| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_3852 |
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| Symbol | |
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| ID | 4024368 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | - |
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| Start bp | 4290646 |
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| End bp | 4292097 |
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| Gene Length | 1452 bp |
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| Protein Length | 483 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637964056 |
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| Product | hydrogenase 4 subunit F |
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| Protein accession | YP_570974 |
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| Protein GI | 91978315 |
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| COG category | [C] Energy production and conversion
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG0651] Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0294681 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATTTGT CCGGCCTCGA TCCGGTGGTG GGCGTGCTGC TGATTCCGGT CTGCGCCGCC
GCGGTGCTTG CGGTGCTGCC GGGTTACAAA CTCACAGCGC AGCTCAACGT GCTGGCAAGC
CTCGGCAGCC TGGTCTGCGC CGCCTCGCTG CTGGTGCTGC CGCGCCCGGC GCCGGGTCCT
TACATCCTGG TCGACGATCT CAACATCGTC TTCATCGTGC TCAACACCTT CGTCGGCTTC
ACCACCAGCC TGTTCAGCGC CAGCTACATC GCCCACGAGC TCGAGACCGG CAAGCTGACG
CCGACCTATC TGCGGTTCTA CCACGCGATG TATCAGATCA TGATGTTCGG CATGAATCTG
GCGTTCGTGT CCAACAATAT CGGCCTGATG TGGGTCGCGG TCGAGCTGGC GACGCTGACC
ACGGTGTTGA TGGTCGGCAT CTATCGCACG CCGGCGGCGC TGGAAGCGGC GTGGAAATAC
TTCATCCTCG GCAGCGTCGG TATCGCGCTG GCGCTGTTCG GCACCATCCT GGTCTACATG
GCGGCGCGGC CGGTGGTCGG CGAAGGGCAG GACGGCATGA TCTGGACCGT GCTGGTGTCG
CGCGCCGCCG GCTTCGACGC GCCGCTGTTG AACGTCGCCT TCGTGTTCCT GTTCCTCGGC
TACGGCACCA AGGTCGGCCT TGCGCCGCTG CACGCCTGGC TGCCGGACGC CCACGCCGAG
GGTCCGACGC CGATCTCGGC GGTGCTGTCG GGCCTGTTGC TCAACGTTGC GTTGTACGCG
TTGCTGCGCT TCAAGGTGCT GCTCGCCGCC AATGCCGAAA CCATGCCGCC CGGGATTCTG
ATGATCGTGA TGGGGCTGGC GTCGCTGCTG TTCGCCGCCT TCATGCTGTA TCGGCGGCGC
GACATCAAAC GGCTGTTCGC CTATTCGTCG ATCGAGCACA TGGGCATCAT CGTGTTCGCC
TTCGGCATGG GCGGGCCATT GGCGAATTTT GCGGGCCTGC TGCACATGGT GATGCACAGT
CTGACCAAGT CGGCGATCTT CTATGCGGTC GGCCACATCA CCCAAGTCAA GGGAACGCAG
TCGTTGTCGA AGATTCGCGG CATCACCGAG TCCCATCCGG TGCTCGGCTG GGGCCTGGTC
GTCGGCGTGG TGGCGATCGC GGGCCTGCCG CCGCTCGGCA TCTTCATGAG CGAGTTCCTG
CTGGTATCCT CGACCTTCGC GCGCTCGCCG TTGCTGGCTT TGCTACTGGT GTTTGGATTG
CTTGTCGCGT TCGGCGCGCT GATGCTGCGG CTGACCGGCA TCGCCTTCGG CGAGCCGCGC
GGCAGCCGTG AACCCGTGCA GGCGTCCTAC GTGCCGATGT TCGCGCATCT CGCCTTGGTG
TTGATTGCCG GCGTCTATCT GCCGGCGCCG GTGGTGGCGT GGTTCCAGCA CGTCGCCAAG
CTACTGGGCT AG
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| Protein sequence | MNLSGLDPVV GVLLIPVCAA AVLAVLPGYK LTAQLNVLAS LGSLVCAASL LVLPRPAPGP
YILVDDLNIV FIVLNTFVGF TTSLFSASYI AHELETGKLT PTYLRFYHAM YQIMMFGMNL
AFVSNNIGLM WVAVELATLT TVLMVGIYRT PAALEAAWKY FILGSVGIAL ALFGTILVYM
AARPVVGEGQ DGMIWTVLVS RAAGFDAPLL NVAFVFLFLG YGTKVGLAPL HAWLPDAHAE
GPTPISAVLS GLLLNVALYA LLRFKVLLAA NAETMPPGIL MIVMGLASLL FAAFMLYRRR
DIKRLFAYSS IEHMGIIVFA FGMGGPLANF AGLLHMVMHS LTKSAIFYAV GHITQVKGTQ
SLSKIRGITE SHPVLGWGLV VGVVAIAGLP PLGIFMSEFL LVSSTFARSP LLALLLVFGL
LVAFGALMLR LTGIAFGEPR GSREPVQASY VPMFAHLALV LIAGVYLPAP VVAWFQHVAK
LLG
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