| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_3842 |
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| Symbol | |
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| ID | 4024358 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | - |
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| Start bp | 4278720 |
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| End bp | 4280099 |
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| Gene Length | 1380 bp |
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| Protein Length | 459 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637964046 |
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| Product | two component, sigma54 specific, transcriptional regulator, Fis family |
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| Protein accession | YP_570964 |
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| Protein GI | 91978305 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.0615627 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCCTTC TCATCGTTGG CACCCTGAAG GGCCAGCTCA CCACGGCGAC CAAGATCGCG
ATCGACAACG GCGCGGCGGT CACCCACGCC TCCGACAACG AGCAGGCGAT GCGGGTGCTG
CGAGGCGGCA AGGGCGCCGA CCTGCTGCTG GTCGACGTTG CGATCGATAT CCGCGATCTG
GTGATGCGGC TCGAAGCCGA GCACATCCAC GTCCCGATCG TGGCCTGCGG CATCGCCAGC
GACGCCCGCG CCGCGGTCGC CGCAATCCAT GCCGGCGCCA AGGAGTACAT CCCGCTGCCG
CCGGATCCGG AGCTGATCGC AGCGGTGCTG GCGGCGGTCG CCAACGATTC CCGCGAGCTG
GTGTATCGCG ACGAGGCGAT GGCGAAGGTC GTCAAGCTGG CGCAGCAGAT CGCCGGCTCC
GACGCCTCGG TGATGATCAC CGGCGAGAGC GGCACCGGCA AGGAAGTGCT GGCGCGCTAC
GTCCACACCC GCTCGCACCG GGCGAAGAAG CCGTTCATCA GCATCAACTG CGCAGCGATC
CCCGAGCATC TGCTCGAATC GGAGTTGTTC GGCCACGAGA AGGGCGCCTT CACGGGAGCG
ATCGCGCGCC GCATCGGCAA GTTCGAGGAA GCGACCGGCG GCACGCTGCT GCTCGACGAA
ATTTCCGAGA TGGACGTCCG GCTGCAGTCG AAGCTGCTGC GCGCGATCCA GGAGCGGGTG
ATCGACCGCG TCGGCGGCAG CCGTCCGGTG CCGGTCGATA TTCGGATTCT CGCCACCTCG
AACCGCAATC TGCAGGACGC CGTGCGCGCC GGCACCTTCC GCGAGGACCT GCTGTTCCGG
CTCAACGTCG TCAATCTGAA GATCCCGCCG CTACGCGAGC GGCCGGCCGA CATTCTCGAA
TTGGCGCAGC ATTTCGCCCG CAAATACGCA GAGGCGAACG GCGTGCCGGT CCGGCCGATC
TCGTTCGACG CGCGGCGCGT CCTCACCACG AACCGCTGGC AGGGCAATGT CCGCGAGCTC
GAGAACACCA TTCACCGATC AGTGCTGATG GCGTCGGGCG ACGAGATCGG TGCCGACGCG
ATCCTGACGC CGGACGGCGA CCGGCTCGAC CAGACCAAGA CGCCGCCGGC GGTGGCGCAC
GCCACCTTCG CCGCCGAGCA GGTCACCCGC GCGCTGGTCG GCCGCACCGT CGCCGACGTC
GAGCGCGATT TGATCCTGGA AACGCTGAAG CACTGCCTCG GCAACCGCAC CCACGCCGCC
AACATCCTCG GCATCTCGAT CCGCACGCTG CGCAACAAGC TCAACGAATA CGCCGACGGC
GGCCTGCCGA TCCCCGCCGC CGGCGGTGGC GAGGCGCGGG CCTTTGTGCA AACGGCGTGA
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| Protein sequence | MRLLIVGTLK GQLTTATKIA IDNGAAVTHA SDNEQAMRVL RGGKGADLLL VDVAIDIRDL
VMRLEAEHIH VPIVACGIAS DARAAVAAIH AGAKEYIPLP PDPELIAAVL AAVANDSREL
VYRDEAMAKV VKLAQQIAGS DASVMITGES GTGKEVLARY VHTRSHRAKK PFISINCAAI
PEHLLESELF GHEKGAFTGA IARRIGKFEE ATGGTLLLDE ISEMDVRLQS KLLRAIQERV
IDRVGGSRPV PVDIRILATS NRNLQDAVRA GTFREDLLFR LNVVNLKIPP LRERPADILE
LAQHFARKYA EANGVPVRPI SFDARRVLTT NRWQGNVREL ENTIHRSVLM ASGDEIGADA
ILTPDGDRLD QTKTPPAVAH ATFAAEQVTR ALVGRTVADV ERDLILETLK HCLGNRTHAA
NILGISIRTL RNKLNEYADG GLPIPAAGGG EARAFVQTA
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