| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_3830 |
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| Symbol | |
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| ID | 4024346 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | + |
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| Start bp | 4268453 |
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| End bp | 4269163 |
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| Gene Length | 711 bp |
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| Protein Length | 236 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637964034 |
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| Product | phosphonate C-P lyase system, PhnL |
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| Protein accession | YP_570952 |
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| Protein GI | 91978293 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG4778] ABC-type phosphonate transport system, ATPase component |
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| TIGRFAM ID | [TIGR02324] phosphonate C-P lyase system protein PhnL |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.172282 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCACGC CAATGTCCGC TATGATTCAA CTGACCGATG CCGAAAAAGC CTTCACCATG
CATCTGCAAG GGGGCGTGCG GCTTCCCGTG GTGCGCTGCG TGTCGTTCCA CGTCGACGCT
GGCGAATGCG TGGTGCTGGG TGGCCCATCC GGCGCCGGCA AGTCCTCCAT TCTGAAGATG
GTCTACGGCA ATTATCGCTG CGACGCCGGC CGCATCGACA TTCTGCATGG CGGTGCGACA
ATCAATCTCG CCACCGCCGA ACCCCGGCAA GTGCTGGAGC TGCGCCGCTT CACCATCGGC
TATGTCAGCC AGTTTCTGCG CGCGGTGCCG CGGGTGGCGG CGGTCGACGT GGTGGCGGAG
CCGCTGGTCG CGAACGGCGT CGCCAAGGAC GAGGCGCGTG CTCGCGCAGG CGAGCTGCTG
AAACGGCTGA ACATCGCCGA GCGGCTATGG ACGCTTCCGC CCGCGACGTT CTCGGGCGGC
GAGCAGCAAC GGGTGAACAT CGCCCGCGGC TTCATCGCGC ATTTTCCGAT CCTGCTGCTC
GACGAACCGA CTGCGTCGCT CGACGCCGCC AATCGCGAGG TGGTGATGAG CCTGATCGAC
GAAAAGAAGC GCGATGGCGT CGCCATGATC GCCATCGTCC ACGACGACGA GGTGCGCGCA
CGGATCGCCG ACCGGCTGAT CGATGTCGCT AGCTTCGCCG CGGCGGCCTG A
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| Protein sequence | MSTPMSAMIQ LTDAEKAFTM HLQGGVRLPV VRCVSFHVDA GECVVLGGPS GAGKSSILKM
VYGNYRCDAG RIDILHGGAT INLATAEPRQ VLELRRFTIG YVSQFLRAVP RVAAVDVVAE
PLVANGVAKD EARARAGELL KRLNIAERLW TLPPATFSGG EQQRVNIARG FIAHFPILLL
DEPTASLDAA NREVVMSLID EKKRDGVAMI AIVHDDEVRA RIADRLIDVA SFAAAA
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