| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_3818 |
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| Symbol | |
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| ID | 4024334 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | - |
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| Start bp | 4258090 |
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| End bp | 4259283 |
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| Gene Length | 1194 bp |
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| Protein Length | 397 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637964022 |
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| Product | phosphonate metabolism PhnM |
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| Protein accession | YP_570940 |
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| Protein GI | 91978281 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG3454] Metal-dependent hydrolase involved in phosphonate metabolism |
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| TIGRFAM ID | [TIGR02318] phosphonate metabolism protein PhnM |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.00668671 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCGATA TCCTGATCGA AGGTGGCCGC ACGCTATTGG ATGGCGATCT GAGCGAAGCT
ACGCTCCAGA TCTCCGGCGG GGTGATCGAG GCGGCCGGCT CTGCCTTGCG CCCCGCGGCG
ACTCAGATTG ACGCGAGCGG TCTGCTCGTG CTGCCCGGAA TCGTCGATCT GCATGGCGAC
GCCTTTGAGC GGCAGATGAT GCCGCGGCCA GGTGTCGATT TCCCGATCGA CGTCGCGCTC
GCGGAGAGCG ATCGTCAGGC GATCGGCAAC GGCATCACCA CGATGTTCCA CGCCGTGACA
TGGTCTTGGG AGCCGGGGCT GCGCAGCGCC GCCAATGCCC GGCGGATGCT CGATGCGATC
GACCTGACCA GACCCATGCT CGCCGTCGAC ACGCGCATCC ATCTTCGCCA CGAAACGTTC
AATCTCGACG CCGTCGACGA GATCTCGCGA TGGATCGCTG AAGGCCGCAT CGACCTGTTC
GCGTTCAACG ATCACATGGA TGGGACGATA GCGGATCTTT CGCGTCCGCA CCGGCGCGCC
CGCATGGTCG AGCGCACCGG ATTGTCCGAC GATGAGTTCG ACAGGCTGGT CGAGCGCGTG
GCGTCGCGCA CCGCCGAAGT GCCGGACGCC AATGCGCGCC TGGCCGCCTG CGCCCGCGCC
GCCGGAGTAC CCATGCTGTC TCATGACGAC GATACGCCGC AGATGCGTCG GGAATATCGC
GCGCTCGGCG TCCGCATCGC CGAGTTCCCG ACCACCGAAG ACACCGCGCG CGAGGCTGCG
GCAGCCGGAG ATTTCATCGT TTTCGGCGCG CCCAATGTGG TGCGCGGCGG CAGCCACACC
GGCTGGACCA AAGCCGCCGA CATGATCGGC AAGGGGCTGT GCTCGGTGCT GGCGTCGGAC
TATTATTATC CCGCGCCGCT GCTGGCTGCG TTCCGGCTGG TGCATGACGG CATCCTGCCT
TTGCCGCAGG CTTGGCGGCT GATCTCGGAG TCGCCCGCTT GCGCCGCGGG ACTGTCCGAT
CGTGGCGTGA TTGCCGTCGG CAAGCGCGCC GATATCCTGA TCGTCGACGA CCGGATCGCA
TTGCGGCCGC GGCTGGTCGC GGCGATCGCA TGCGGGCGGC TCGTCTATCT CGATGAGCCG
GAGCGCTTCG TGATGTCGCA CAAGGCGGCG CGGCAGACGG TTGCCGTGGC CTGA
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| Protein sequence | MIDILIEGGR TLLDGDLSEA TLQISGGVIE AAGSALRPAA TQIDASGLLV LPGIVDLHGD
AFERQMMPRP GVDFPIDVAL AESDRQAIGN GITTMFHAVT WSWEPGLRSA ANARRMLDAI
DLTRPMLAVD TRIHLRHETF NLDAVDEISR WIAEGRIDLF AFNDHMDGTI ADLSRPHRRA
RMVERTGLSD DEFDRLVERV ASRTAEVPDA NARLAACARA AGVPMLSHDD DTPQMRREYR
ALGVRIAEFP TTEDTAREAA AAGDFIVFGA PNVVRGGSHT GWTKAADMIG KGLCSVLASD
YYYPAPLLAA FRLVHDGILP LPQAWRLISE SPACAAGLSD RGVIAVGKRA DILIVDDRIA
LRPRLVAAIA CGRLVYLDEP ERFVMSHKAA RQTVAVA
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