| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_3816 |
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| Symbol | |
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| ID | 4024332 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | + |
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| Start bp | 4255787 |
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| End bp | 4257343 |
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| Gene Length | 1557 bp |
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| Protein Length | 518 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637964020 |
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| Product | AMP-dependent synthetase and ligase |
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| Protein accession | YP_570938 |
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| Protein GI | 91978279 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0163789 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATGTCA CGCATGGCCT GCGGCGCGCG CTGCAAGTCA ACCCGGACGG ACTGGCGACC
GTATTCAACG GCCGACGCCG CAACTGGCGC GAGGTCGGCG AGCGCGTCGC GCGGCTCGCC
GCAGGCCTGC GCGCCAGCGG TGTCGCGGAA GGCGAGCGAG TCGCCTTGCT GTCGCTGAAT
TCCGACCGAT ATCTCGAGCT CTATCTCGCC GCCGGCTGGT GCGGCGGCGT CATCGTGCCG
CTCAACATCC GCTGGAGCGT GCTGGAGAAC GAGGACGCGC TGCGCGACTG CCGGGCGGTG
ACGCTGGTGG TCGACAAGAC CTTCGCGGCG ACCGGCGCGG CGATCGCGCA GGCCATCCCC
GGCCTCGCGC TGATCTATGC CGACGACGGC GATCTGCCCG CGGGGATGCA GGGCTACGAG
GACCTGATCG CGTCGAGCGA GCCTATTCCG GACGCGATGC GCAAGGGCGA CGATCTCGCC
GGCATCTTCT ACACCGGCGG CACCACCGGC CGGTCCAAGG GCGTGATGCT CAGCCACACC
AATCTGATGG CCAACGCACT CAACGCCCTC GGAGAAGGGC TGTTTCCGGG AACGTCGGTG
TACCTCCACG CTGCGCCGAT GTTCCACCTC GCCAACGGCG CGGCAATGTA TTCGCTGCTG
CTGTCCGGCG GCTCCAACGT GATGGTGCCT GCGTTCACGC CCGAGGGGGT GATGGCCACG
ATCCAGAACG AGCGCGTCAC CGACGTGCTG CTGGTGCCGA CGATGATCCA AATGTTCGTC
GATCACCCGG CGCTGAAAAC CTATGATCTG TCGTCGCTGA AGAACATCAC CTACGGCGCC
TCCCCGATCA GCGAGGCGGT GCTCGCCCGC GCCAGCGCGG CGCTGCCCGA CGTGCAGTTC
ACCCAGGCTT ACGGCATGAC CGAATTGTCG CCGATCGCGA CGCTGCTGCA CTGGAAGGAG
CATATCGGCG AAGGCAAGGC CAAGGGACGG CAGCGCGCTG CCGGCTGCGC CGCGCTCGGT
TGCGAAGTGC GGATCGTCGA TGCCGACGAC ACCCCGTTGC CGCACGGAAC GGTCGGCGAA
ATCTGCGTCC GCGGCGACAA CGTGATGATG GGCTATTGGG AGCGGCCGGA AGAGACCGCC
CGCGCCCTCG CCGGCGGCTG GATGCACACC GGCGACGGCG GCTACATGGA CGAGCACGGC
TTCGTCTTCG TCGTCGACCG CGTCAAGGAC ATGATCATTT CCGGGGGCGA GAACGTCTAC
TCGGTCGAGG TCGAGAACGC CGTGGCGCAG CACCCCGCGG TCGCGCAATG CGCGGTGATC
GGCATTCCGC ACGAAGCCTG GGGCGAGCAG GTCCACGCCG TGGTGGTCAC CAAGGCGGGC
GCGACGGTCA CCGCCGACGA ACTGATCGCG CACTGCAAGG CGTTGATCGC CGGATACAAA
TGTCCGCGCA GCGTCGACAT CACGGAGACG CCGCTGCCGC TGTCCGGCGC CGGCAAGATC
CTCAAGCGCG AGCTGCGCCA GCCCTATTGG GAAAACCGCG AACGCCGCGT GAGCTGA
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| Protein sequence | MNVTHGLRRA LQVNPDGLAT VFNGRRRNWR EVGERVARLA AGLRASGVAE GERVALLSLN
SDRYLELYLA AGWCGGVIVP LNIRWSVLEN EDALRDCRAV TLVVDKTFAA TGAAIAQAIP
GLALIYADDG DLPAGMQGYE DLIASSEPIP DAMRKGDDLA GIFYTGGTTG RSKGVMLSHT
NLMANALNAL GEGLFPGTSV YLHAAPMFHL ANGAAMYSLL LSGGSNVMVP AFTPEGVMAT
IQNERVTDVL LVPTMIQMFV DHPALKTYDL SSLKNITYGA SPISEAVLAR ASAALPDVQF
TQAYGMTELS PIATLLHWKE HIGEGKAKGR QRAAGCAALG CEVRIVDADD TPLPHGTVGE
ICVRGDNVMM GYWERPEETA RALAGGWMHT GDGGYMDEHG FVFVVDRVKD MIISGGENVY
SVEVENAVAQ HPAVAQCAVI GIPHEAWGEQ VHAVVVTKAG ATVTADELIA HCKALIAGYK
CPRSVDITET PLPLSGAGKI LKRELRQPYW ENRERRVS
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