Gene RPD_3813 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_3813 
Symbol 
ID4024329 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp4253351 
End bp4253797 
Gene Length447 bp 
Protein Length148 aa 
Translation table11 
GC content63% 
IMG OID637964017 
Producthypothetical protein 
Protein accessionYP_570935 
Protein GI91978276 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.0202371 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTTGATC AGTCTGCGGT CGGTCACCGG TTCACGCCGG TCACCGCCCA TGTCGAGCCA 
GGGCGTCTGC GCTACTTTCT CGATACGCTC GGCGAGCGCA ATCCGGTTTA TCGTGATGCC
GCGGCAGCCA GGACGGACGG TTTCGCGGCG ATCCCGGTGC CGCCGACCTA TCTGTTCTGT
CTCGAGATGC TCGACAACGA GAAGCCGTTC GAGTTTCTCA CCGCGCTCGA TATCGATCTC
GGGCGCGTGC TGCACGGCGA GCAAAGCTTC GTCTATCACA CCCCGGTGGT GGTCGGCGAT
ACGCTGACCT TCAGCCCGCG CGTCACCAGC GTCACAGACA AAAAGGGCGG CGCGCTGACG
CTGATCGTGG TCGAAACTGC GGTCACCAAT CAGAACGGCG TCCACGTCGC TGATACGGCG
CGGACCGTCG TGGTGCGGAA CGGATGA
 
Protein sequence
MVDQSAVGHR FTPVTAHVEP GRLRYFLDTL GERNPVYRDA AAARTDGFAA IPVPPTYLFC 
LEMLDNEKPF EFLTALDIDL GRVLHGEQSF VYHTPVVVGD TLTFSPRVTS VTDKKGGALT
LIVVETAVTN QNGVHVADTA RTVVVRNG