Gene RPD_3812 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_3812 
Symbol 
ID4024328 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp4252932 
End bp4253354 
Gene Length423 bp 
Protein Length140 aa 
Translation table11 
GC content63% 
IMG OID637964016 
ProductMaoC-like dehydratase 
Protein accessionYP_570934 
Protein GI91978275 
COG category[I] Lipid transport and metabolism 
COG ID[COG2030] Acyl dehydratase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.0106778 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGTCA TGACCGAAAT GAAGACGGAA GTCGCGGTCG GCGACCGCAT GGTGCACAAG 
CAGTTTCCTG CGATCAGCCG GCATCAGCTG GCGCTGTATT GCGGCGCTTC GGGAGACCAC
AACCCGATCC ATGTCGACAT CGACTTTGCC AAGGCCTCGG GTTTCCCGGA TGTATTCACG
CATGGCATGC TGGTGATGGG TTATCTCGGC CAAGCGCTCA GTGACGCGTT CGCGCCGAGC
CGGATCCGTG CGTTCTCGAC CCGCTTCGCC GCGATCACCC AGCTTGGCGC CGAGTTGACC
TGCGAAGGGA CCGTCGCCGA AATATTCGAG GCCGGCGGCG AGCGTCGCGC CCGGCTCGCC
CTCACAACAC GCGACCAGAA CGGCGAGATC AAACTTGCCG GCGAGGCTGT CGTCGCGCTC
TAG
 
Protein sequence
MNVMTEMKTE VAVGDRMVHK QFPAISRHQL ALYCGASGDH NPIHVDIDFA KASGFPDVFT 
HGMLVMGYLG QALSDAFAPS RIRAFSTRFA AITQLGAELT CEGTVAEIFE AGGERRARLA
LTTRDQNGEI KLAGEAVVAL