Gene RPD_3809 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_3809 
Symbol 
ID4024325 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp4250100 
End bp4250876 
Gene Length777 bp 
Protein Length258 aa 
Translation table11 
GC content69% 
IMG OID637964013 
Productenoyl-CoA hydratase/isomerase 
Protein accessionYP_570931 
Protein GI91978272 
COG category[I] Lipid transport and metabolism 
COG ID[COG1024] Enoyl-CoA hydratase/carnithine racemase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.97613 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGTGGG TCGTATCGGA GCAGCGCGGC GCGGTCGCGG TGCTTACACT CGATAATCCG 
GAGCAATACA ACGCGATGCG TCCCGGTCTG CTCGGCGATC TGAACGCCGC GCTGACCGCG
GCGCTGGCCG ATGCCTCCGT ACGGGCGATC CTGCTGACCG GCGCCGGCAA GGGCTTCTGC
GCCGGCGCCG AACTCGGCGG CGACACGTTC AGTGCCGGCG CGAATGTCGC GCCGTGGATG
CGCGCCGAAC TCAGCCCGGT GCTCGAGGCG ATGCGCAACG CGGACAAGCC GATCGTCGTG
GCAGTCAACG GCGCCGCGGC GGGCGCCGGT GTCGGCCTCG CGCTCGCAGG CGACATCGTG
CTCGCCGCGC GCTCGGCGAA GTTCGTGCTG AGCTTCGTCC GGCTCGGCGC CGCGCTCGAT
GCCGGCACCT CGCTGTTTCT GCAGCGCTCG ATCGGCGTGG CGCGGGCGCG GGCGTTGGCG
TTGCTCGGCC GGCCGCTCAG TGCCGAACAA GCGGCGCAAT GGGGCCTGAT CTTCCAGGCG
GTCGAGGATT CCGAACTGAT GAAAGAGGCG ATGGCGATCG CACAGCAGCT CGCCGATGGG
CCGCCGATCG GTATCGGCCT GATCAAGCGA CAGATCGAAA TCGCATGGAG CGCGCCGCTC
GCCGACACGC TCGACGACGA GGCCGAGCGT CAGGGCAGGG CGTTCGCCAC TGCCGATTTG
CGTGAGGGCG CGATGGCATT CGTCGAAAAG CGCGCGCCGC GCTTCACCGG ACGATAA
 
Protein sequence
MAWVVSEQRG AVAVLTLDNP EQYNAMRPGL LGDLNAALTA ALADASVRAI LLTGAGKGFC 
AGAELGGDTF SAGANVAPWM RAELSPVLEA MRNADKPIVV AVNGAAAGAG VGLALAGDIV
LAARSAKFVL SFVRLGAALD AGTSLFLQRS IGVARARALA LLGRPLSAEQ AAQWGLIFQA
VEDSELMKEA MAIAQQLADG PPIGIGLIKR QIEIAWSAPL ADTLDDEAER QGRAFATADL
REGAMAFVEK RAPRFTGR