| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_3802 |
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| Symbol | |
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| ID | 4024318 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | + |
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| Start bp | 4241433 |
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| End bp | 4243232 |
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| Gene Length | 1800 bp |
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| Protein Length | 599 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 637964006 |
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| Product | allophanate hydrolase |
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| Protein accession | YP_570924 |
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| Protein GI | 91978265 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0154] Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases |
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| TIGRFAM ID | [TIGR02713] allophanate hydrolase |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTGAAA CCATCGCCGA GATCGTCGCC GCCCATCGCG CCGGCGCAAG CACGCCCGCG
CAGACCGTGG CGCGTTGCTA TCAGCGGATC CGCGCACATA GCGATCCCGC GATCTTCATC
ACCCTGCGCG ATGAGGCCGA GGCGGTTGCC GAAGCCGTCG CGCTCGCCGC CAGGGATCCG
TCGCTGCCGC TCTATGGCGT GCCGGTTGCG GTGAAGGACA ATATCGACGT CGCCGGCCTG
CCGACCACGG CGGCCTGCCC GGCCTTCGCC TATCGGCCGT CGAAGGATTC CACGGCGGTG
GCGAGGCTGC GCGCCGCGGG CGCGATCGTC ATCGGCAAAA CCAATCTCGA TCAGTTCGCC
ACCGGCCTCG TCGGCGTGCG GTCGCCCTAC GGGATTCCAC GCAACGCAAT GCGTCCTGAC
CTCGTGCCCG GCGGTTCGAG TTCGGGATCG GCCGTCGCGG TCGCGGCCGG CCTCGTGCCG
CTGTCGCTCG GCACCGACAC CGCGGGCTCC GGCCGCGTGC CCGCGATGCT CAACAACATC
GTCGGGCTGA AGCCGAGCCT CGGCCTGATC TCGACCACAG GCCTCGTGCC GGCGTGCCGC
ACGCTGGATT GCATCTCGGT GTTCGCGCTG ACGGTCGACG ACGCGATGAC CGCGCTGCGC
GTAATGGGCG CCCCGGACGC TACCGATCCC TATTCGCGCG ATCGGGCTCT TGCGACGATG
ACGGCCACCC CGGTCAGGCT GCGGCTCGGT GTGCCGCGAC GCGACCAATG GCAATTCTTC
GGCGATCAGC AAGCCGAGCA AGCCTACGCC GACGCGCTGC GACGCTGGAC CGCCCTCGGC
GCGGAATTGA TCGACGTCGA TATTGAGCCG CTCTACGAGA CCGCGCGTTT GCTCTACGAA
GGACCGTGGG TCGCCGAGCG CTATCTCGCC ATTCGCGAGC TGATCGACAC GACGCCCGAC
GCGGTGCATC CGGTGACGCG GGCGATCACG CTGGGCGGCA AGGGGATCAC CGCGGCCGAC
ACCTTCGCCG CGCTCTATCG CCTGCAGGCG CTGCGCACGA TCGCGGAGCC GGCCTTCGCC
GCAATCGATG CGCTGGTTCT GCCGACCGCG CCGACCGCCT ACACGGTCGA TGAGGTGCTC
GCCGAGCCGA TCGCACTCAA CAGCCGGCTG GGCACCTACA CCAACTTCGT CAATCTGCTC
GACCTTTGCG GCCTCGCGCT GCCCGCCTCG ATTCGCGCCG ACGGGATTCC GTTCGGCATC
ACTTTGCTGG CGCCGGGCGG CCACGATGCG CAGCTCGCCA GGATCGGACG GCTCTTCCAC
GCCGATACCG CGCTGCCGAT GGGGGCCACG GGGCGGAGGC AACCCGATCT CACTCCGCTG
GACCCGCCAG CCGACAGGGA GGCGATTGCG ATCGCCGTGG TCGGCGCGCA TCTGTCCGGC
ATGGCGCTGA ACGGCGAACT CACCACCCTC GGCGGACGGC TCGCACGCGC GACGACGACC
GGGCCGGACT ACAAGCTCTA TGCGTTGGAG GGCACCACGC CACCGAAACC CGGCATGCTG
CGCGTCGCCC CCGGCACGGG CGCCGCGATC GCTGTCGAAG TGTGGTCGCT GTCGCCCGCC
GCATTCGGGC ATTTCGTCGG CGCGATCCCG CAGCCGCTGT CGATCGGTAC CGTCACGTTG
GCGGACGGCG CAAAGGTCAA GGGCTTTCTC GTCGAGCCAG CGGCGCTCGA CGGCGCCCGG
GAGATCACGC ATTTCGGCGG CTGGCGCGCT TACATGGCGG AGCTGGCCGC AACCGGGTGA
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| Protein sequence | MTETIAEIVA AHRAGASTPA QTVARCYQRI RAHSDPAIFI TLRDEAEAVA EAVALAARDP
SLPLYGVPVA VKDNIDVAGL PTTAACPAFA YRPSKDSTAV ARLRAAGAIV IGKTNLDQFA
TGLVGVRSPY GIPRNAMRPD LVPGGSSSGS AVAVAAGLVP LSLGTDTAGS GRVPAMLNNI
VGLKPSLGLI STTGLVPACR TLDCISVFAL TVDDAMTALR VMGAPDATDP YSRDRALATM
TATPVRLRLG VPRRDQWQFF GDQQAEQAYA DALRRWTALG AELIDVDIEP LYETARLLYE
GPWVAERYLA IRELIDTTPD AVHPVTRAIT LGGKGITAAD TFAALYRLQA LRTIAEPAFA
AIDALVLPTA PTAYTVDEVL AEPIALNSRL GTYTNFVNLL DLCGLALPAS IRADGIPFGI
TLLAPGGHDA QLARIGRLFH ADTALPMGAT GRRQPDLTPL DPPADREAIA IAVVGAHLSG
MALNGELTTL GGRLARATTT GPDYKLYALE GTTPPKPGML RVAPGTGAAI AVEVWSLSPA
AFGHFVGAIP QPLSIGTVTL ADGAKVKGFL VEPAALDGAR EITHFGGWRA YMAELAATG
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