Gene RPD_3796 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_3796 
Symbol 
ID4024312 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp4237352 
End bp4237726 
Gene Length375 bp 
Protein Length124 aa 
Translation table11 
GC content61% 
IMG OID637964000 
Productresponse regulator receiver 
Protein accessionYP_570918 
Protein GI91978259 
COG category[T] Signal transduction mechanisms 
COG ID[COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.787937 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCGATT TGTTGAGCAA GAGGCCGGTC GTTCTTGTCG TCGAAGACGA GCCTCTTCTG 
CGCATGAACG CCGTCGATAT CGTCGAAGAG GCCGGATTCG AGGTGATTGA GGCGGGCAAC
GCCGACGATG CGATCGCCAT TCTCGAAAGC CGCAACGACA TTCGCGTGGT GTTCACCGAT
GTCCAGATTC CTGGGTCGAT GGATGGGCTC AAGCTGGCCC GCGCGGTGCG GGGCCGCTGG
CCGCCGATCC AGATCATTGC CACATCGGGC CGCGTCAAGG TTTCCGGAGC CGATTTGCCC
GACGGCGGGC AGTTTCTGGC CAAGCCGTAT ACGCCTAGTC AGGTCGCAAG GGTGTTGATC
CAACTGATTT CCTGA
 
Protein sequence
MPDLLSKRPV VLVVEDEPLL RMNAVDIVEE AGFEVIEAGN ADDAIAILES RNDIRVVFTD 
VQIPGSMDGL KLARAVRGRW PPIQIIATSG RVKVSGADLP DGGQFLAKPY TPSQVARVLI
QLIS