| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_3773 |
|---|
| Symbol | |
|---|
| ID | 4024289 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris BisB5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007958 |
|---|
| Strand | + |
|---|
| Start bp | 4211369 |
|---|
| End bp | 4212682 |
|---|
| Gene Length | 1314 bp |
|---|
| Protein Length | 437 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 637963977 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_570895 |
|---|
| Protein GI | 91978236 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG4949] Uncharacterized membrane-anchored protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.0253353 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 6 |
|---|
| Fosmid unclonability p-value | 0.0136912 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGGCTG AAGTTCTGAT TGGCGACGGC GACGTAAGAC TTTCGCCGCA TCCCTTGCGG
GCCGTCGTGC TCGGCGAAGT CCACGCCCGT CCCTTCACCG CGCTCGCGGT TCCGGCGCGT
GTGCTGCACT TTGCCTTCGA CACGTCCAGC GACAAGGGCG GCGCCGACCG CGCCGCGATG
ACGAGCTTCT GCGAATCGCG CGGGCTTCTG CCTCCGGCGC AGGGTGAAAA GCATCACCGC
GCCAGCTTCG GCACGACGAT GCTGCGTTGG GAGCAGCATT CGGAGTTCAC GACCTACACC
TGGGAATTCA CCGCCGATCC CACGGCGACG CCGTTTCACC CCGAAGCCTC GTCGCTCGCC
TCCCCGATGC GGCTGCTGCC GCAGCCCGGG CCGCTGCTGG TCGCGGTCGA TCTGCATATT
CTGCCCGACG ATCCGCCCCG CACCTCGCCG GAGCGGCTGT TCGATCGCGC CAGCCTCGCG
GTCGCCGAGA ATTCCGATGG CGCGGCGGTC TACGCGACCG ATTTTCAGCC CGGCCCATCC
GGATTCGTGC GGGTGCTGGT GATCGATCGC GGCATGGCGC CGGAGCGCGC CGGCGCATTG
GTCCAGCGGG TGCTGGAAAT CGAAACCTAT CGCACGCTTG CGCTGCTCGG CCTGCCCGAA
GCGCAGCGGT TGGGGCCGTC GATCAGCAAC GGCGAACGCC GCCTCGCAGA AGTCACCGCG
GAGATGCGCA CCGCCGGCGA TCTCGCCATG AACAACAAGC ACCTGCAGGA ATTGACCGAA
ATCGCCGCCG AAGTCGAGGC CGGCGCCGCC GCGAGCCTCG GCCGGTTCAG CGCCAGCCGC
GCCTATGAAG AGATCATGAC GGGCCGGCTG GCGACGCTCG GCGAACGCAA GGTCGGCGGG
CTGCCGACCT GGTCGTCATT CCTCGCACGC CGGATGAAGC CCGCGATGCG CACCTGCGCG
ACCACCGAGG CGCGGCAGTC GGACCTGTCG CTGAAACTCG CGCGCGCCGC CAACCTGCTG
CGCACCCGCG TCGACGTCGA AGTCGAACAG CAGAACCAGG ACCTTCTGAA ATCGATGAAC
GCGCGGACGC GGCTGCAATT GCGGCTGCAG GCCACCGTCG AAGGCCTCTC CACCGCGGCG
ATCACCTACT ACGTCGTCGG ACTGTTCGGC TATCTGGTGA AGGGCCTGTA CGACAGCGGC
CAGATCAAGG CCGAGCCGAG CCTCGTCACT GCGGGATTCG TGCCGATCGC AGCGCTCTCG
ATCTGGTGGA CAGTTCGTCG CGTCCGCAAG CGGCACATTC CGGACGTCGA CTGA
|
|---|
| Protein sequence | MTAEVLIGDG DVRLSPHPLR AVVLGEVHAR PFTALAVPAR VLHFAFDTSS DKGGADRAAM
TSFCESRGLL PPAQGEKHHR ASFGTTMLRW EQHSEFTTYT WEFTADPTAT PFHPEASSLA
SPMRLLPQPG PLLVAVDLHI LPDDPPRTSP ERLFDRASLA VAENSDGAAV YATDFQPGPS
GFVRVLVIDR GMAPERAGAL VQRVLEIETY RTLALLGLPE AQRLGPSISN GERRLAEVTA
EMRTAGDLAM NNKHLQELTE IAAEVEAGAA ASLGRFSASR AYEEIMTGRL ATLGERKVGG
LPTWSSFLAR RMKPAMRTCA TTEARQSDLS LKLARAANLL RTRVDVEVEQ QNQDLLKSMN
ARTRLQLRLQ ATVEGLSTAA ITYYVVGLFG YLVKGLYDSG QIKAEPSLVT AGFVPIAALS
IWWTVRRVRK RHIPDVD
|
|---|
| |