| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_3770 |
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| Symbol | bchD |
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| ID | 4024286 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | - |
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| Start bp | 4207334 |
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| End bp | 4209100 |
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| Gene Length | 1767 bp |
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| Protein Length | 588 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 637963974 |
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| Product | magnesium chelatase subunit D |
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| Protein accession | YP_570892 |
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| Protein GI | 91978233 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG1240] Mg-chelatase subunit ChlD |
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| TIGRFAM ID | [TIGR02031] magnesium chelatase ATPase subunit D |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.804805 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.0156101 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCATCT CGCTCGCATG GTCCGATGCG GTGACCGCGG CGCAGTTGTT CGCGGTCGAC
CCGGTCGGCA CCGGCGGTGT GCTGCTGCGC TCGCGCGCGG GGCCGGTGCG CGACCGCTGG
CTTGCGACGC TGCGCGCCGC GCTGCCGCCT GATCAACCCT ACAGAAACCT GCCGCTGCAT
ATTGCCGACG GTCGCCTGCT CGGCGGCCTC GATCTGTCCG CGACGCTGCT TGCCGGCCGC
CCGGTCGCCG AGCGCGGTCT GCTGGCGGAA GCCGATGGCG GCGTGCTGGT CGTGGCGATG
GCGGAGCGAA TGCAGGCCTC GACCAACGTG TATCTCACTG CGGCGATGGA CGCGCAGGAG
ACCGCGGTCG AGCGCGACGG TCTGTCGTTG CGGATGCCGG CGCGGTTCGG CGTTGTGGCG
CTCGACGAAG GCCTCGAGGA CGAGTTCGCG CCCGCCGGTC TGCGTGATCG GCTCGGCTTC
CATCTCGATC TCGATCAGTT CGCCTGGCGT GACACCGAGG ATTTCCCGGT GCAGCTCGAC
GACATCATCG CGGCCCGTGC GCGTCTTGCT GGAATTAAAG TCGGTCGTGA GCAGATCGAA
GCGATCTGCT CAGCCGCCGC GGCGCTCGGC ATCATCTCGC TGCGTGCGCC GCTGCTGGCG
ATCCGCGCGG CGCGGGCGAG CGCGGCGCTG TTCGACCGGG TCACCATCGA GCAGGACGAC
ATCACGCTTG CCGCGCGGCT GGTGCTGGCG CCACGCGCGA TGGTCTTTCC GCAGTCCGAT
CAGCCGGACG AGGCCGAACC GCCTCCGCCC GAGCCGCCGC CGGAAGACAA TTCCGAGGAC
AACAACGACC AGGAACAGCA GACGCCGGAT ATCGACCGCG CGCTCGACGA GGTGATCCTC
GCCGCAGTCA AGGCGGCGAT GCCGCCCGGC GTGCTGGAAG CGCTGCGGGC TTCCGCCGGC
CGTGCGCGAG CCCGCTCGGC CGGCAAGGCC GGCGAGCTGC AGAAGTCGAA GAAGCGCGGC
CGCCCAACCG GCAGCGTGCG CGGCGAATTG CGCGACGGCT CCAAGCTCAA CGTCATCGAG
ACGCTGCGCG CCGCGGCGCC GTGGCAGCCG CTGCGCCGGC GTCAGGCGGA AGGCCGCCCC
GGCAGCGCGC CGCGTATTCT CGTCGAGAAG GACGATTTCC GCATCGCGCG CTTCAAGCAG
CGCACCGAGA CCATCACCAT CTTCGTGGTC GACGCCTCGG GCTCGGCGGC GCTGCATCGT
CTCGCCGAAG CCAAGGGCGC GGTCGAATTG TTACTTGCCG ATTGCTACGT GCGCCGCGAC
CAGGTGGCCA TGATCGCGTT CCGCGGCAGC ATCGCCGAAA TCCTGCTGCC GCCGACGCGA
TCGTTGGCGC GCGCCAAGCG CAGCCTCGCG GGTCTGCCGG GCGGCGGCGG CACGCCGCTC
GCAGCCGGAC TCGACGCAGC GTTCATGCTG GCCGATTCGA TCAAGCGCAA AGGTCAGACG
CCGACCGTGA TCGTGCTGAC CGACGGCCGC GCCAACATCG CGCGCGACGG CGCGCCGGGC
CGGCCGCAGG CCGAGGAAGA CGCCAAGGCG TCAGCGCGGC AATTCCGTGT CGCGGCGATC
AATTCGGTGG TGATCGACAT GTCGCCGCGG CCGGGGCCGC AGGCCGAGTC CTTCGCCAAG
GAAATGGACG CACGCTATTT GCCGATGCCC CACGCCGACG CCACCGTCTT GGCGAAAGCG
GTGACCGCAG CGACGCGCGC CGGCTGA
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| Protein sequence | MSISLAWSDA VTAAQLFAVD PVGTGGVLLR SRAGPVRDRW LATLRAALPP DQPYRNLPLH
IADGRLLGGL DLSATLLAGR PVAERGLLAE ADGGVLVVAM AERMQASTNV YLTAAMDAQE
TAVERDGLSL RMPARFGVVA LDEGLEDEFA PAGLRDRLGF HLDLDQFAWR DTEDFPVQLD
DIIAARARLA GIKVGREQIE AICSAAAALG IISLRAPLLA IRAARASAAL FDRVTIEQDD
ITLAARLVLA PRAMVFPQSD QPDEAEPPPP EPPPEDNSED NNDQEQQTPD IDRALDEVIL
AAVKAAMPPG VLEALRASAG RARARSAGKA GELQKSKKRG RPTGSVRGEL RDGSKLNVIE
TLRAAAPWQP LRRRQAEGRP GSAPRILVEK DDFRIARFKQ RTETITIFVV DASGSAALHR
LAEAKGAVEL LLADCYVRRD QVAMIAFRGS IAEILLPPTR SLARAKRSLA GLPGGGGTPL
AAGLDAAFML ADSIKRKGQT PTVIVLTDGR ANIARDGAPG RPQAEEDAKA SARQFRVAAI
NSVVIDMSPR PGPQAESFAK EMDARYLPMP HADATVLAKA VTAATRAG
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