| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_3766 |
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| Symbol | |
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| ID | 4024282 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | - |
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| Start bp | 4202544 |
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| End bp | 4204079 |
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| Gene Length | 1536 bp |
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| Protein Length | 511 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637963970 |
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| Product | amine oxidase |
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| Protein accession | YP_570888 |
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| Protein GI | 91978229 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG1233] Phytoene dehydrogenase and related proteins |
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| TIGRFAM ID | [TIGR02734] phytoene desaturase |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.918224 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.0064797 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCTCGATC CAGGTCCCAA AACCGCTCCT CGTCTCCCTC GTGATCACGC ACCGCACGCG
GTGGTGATCG GCTCCGGCTT TGGCGGTCTC GCCGCCGCGG TCCGGCTCGG TGCCAAAGGG
TACCGTGTCA CCGTCTTGGA GAAGCTCGAT AAGCCGGGCG GCCGCGCTTA CGTCCACAAG
CAGGACGGCT TCACCTTCGA CGCAGGTCCG ACCATCGTCA CCGCGCCTTA TCTGTTCGAA
GAGCTGTGGA AGCTCTGCGG TAAGCGAATG TCCGACGACG TCACGCTGAA GCCGATGGCG
CCGTTCTATC GCATCCGCTT CGACGACGGC ACGCATTTCG ATTATTCCGA CGACCGCGAC
GCGGTGCTGG ATCAGATCGC GAAATTCTGC CCGGACGACG TGCCGGCCTA CGACCGCTTC
ATGGCGGCGT CGCAGGCGAT CTTCAAGGTC GGCTTCGAGC AACTCGGCGA TCAGGCGTTC
AGCCGCTTCA CCGACATGCT GAAGATCGCG CCGGACATGA TCAAGCTGGA GAGCTATCGC
AGCGTCTACG GGCTGGTCGC GAAGCACTTC AAGGATCCGA AGCTGCGTCA GGTGTTCAGC
TTCCATCCGC TGCTGATCGG CGGCAACCCG TTCATGTCGA GTTCGGTGTA CTGCCTGATC
ACCTATCTGG AGAAGCAGTG GGGCGTGCAC TCGGCGATGG GCGGCACCGG CAGCCTGGTG
ACCGGGCTGG TGAAGCTGAT CGAAGGGCAG GGCAACGAGA TCCGCTACAA TCAGGACGTT
CGCCAGATCG TCGTCGAGAA CGGCGCCGCC TGCGGCGTCA AGCTCGCCGA CGGCGAAGTG
ATCAAGGCCG ACATCGTGGT GTCGAATGCG GATTCGGCCT CGACCTATCG TTATCTACTG
GCGCCGGAGA CGCGCAGCCG TTGGACCGAC GCCAAGATCG AGAAGTCCCG TTACTCGATG
AGCCTGTTCG TCTGGTACTT CGGCACGAAG CGGCGGTACG AGGACGTCAA ACACCACACC
ATCCTGCTCG GCCCGCGCTA CCGCGAGCTG ATCACCGACA TCTTCTCGCG CAAGATCGTC
GCCGATGATT TCAGCCTGTA TCTGCACCGC CCGACCGCGA CCGATCCGTC GCTGGCGCCG
CCCGGCTGCG ATACGTTCTA CGTACTGTCG CCGGTGCCGA ACCTGCTCGG CGACATCGAC
TGGACCACCA AGGCCGAGAG CTATCGCGCA TCGATCGCCA AGATGCTCGG CGCCACCGTG
CTGCCCGATC TCGAAAATCA GGTGGTGACC TCGAAGCTCA CCACGCCGCT GGATTTCCGC
GACCGGCTGT CGTCGTTCCG CGGTGCTGCG TTCGGGCTCG AGCCGGTGTT GTGGCAGAGC
GCCTGGTTCC GGCCGCACAA CCAGAGCGAA GACGTCAAGA ATCTGTATCT CGTCGGCGCG
GGAACGCATC CCGGCGCTGG TCTCCCCGGG GTGTTGTCCT CGGCACGCGT GCTCGATTCC
CTGGTCCCCG AGGCTGACAG TCTGGTGAAT TCATGA
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| Protein sequence | MLDPGPKTAP RLPRDHAPHA VVIGSGFGGL AAAVRLGAKG YRVTVLEKLD KPGGRAYVHK
QDGFTFDAGP TIVTAPYLFE ELWKLCGKRM SDDVTLKPMA PFYRIRFDDG THFDYSDDRD
AVLDQIAKFC PDDVPAYDRF MAASQAIFKV GFEQLGDQAF SRFTDMLKIA PDMIKLESYR
SVYGLVAKHF KDPKLRQVFS FHPLLIGGNP FMSSSVYCLI TYLEKQWGVH SAMGGTGSLV
TGLVKLIEGQ GNEIRYNQDV RQIVVENGAA CGVKLADGEV IKADIVVSNA DSASTYRYLL
APETRSRWTD AKIEKSRYSM SLFVWYFGTK RRYEDVKHHT ILLGPRYREL ITDIFSRKIV
ADDFSLYLHR PTATDPSLAP PGCDTFYVLS PVPNLLGDID WTTKAESYRA SIAKMLGATV
LPDLENQVVT SKLTTPLDFR DRLSSFRGAA FGLEPVLWQS AWFRPHNQSE DVKNLYLVGA
GTHPGAGLPG VLSSARVLDS LVPEADSLVN S
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