| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_3760 |
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| Symbol | |
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| ID | 4024276 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | + |
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| Start bp | 4197472 |
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| End bp | 4199046 |
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| Gene Length | 1575 bp |
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| Protein Length | 524 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637963964 |
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| Product | FAD dependent oxidoreductase |
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| Protein accession | YP_570882 |
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| Protein GI | 91978223 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG1233] Phytoene dehydrogenase and related proteins |
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| TIGRFAM ID | [TIGR02734] phytoene desaturase |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.00569391 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAGAGATC AGACCGGAAA GAATCGCGTG GTGGTGATCG GCGCGGGCGT GGCCGGACTG
ACCTCCGCCC TCGCCTTGTC CGCCCGCGGT CTGGACGTGA CCGTGGTCGA GCGCGCGGCT
GCTCCCGGCG GCAAGATCCG CGAGGTCGGA ATCGGCGCCT CGCGGATCGA CAGCGGCCCG
ACCGTTTTCA CCATGCGCTG GGTGTTTGAG GAACTGTTCG CCTCTGCCGG GCTGGACTTC
GCCGATCACG TCCGGCTACG CCCCCTCTCC GTGCTGGCAC GCCACGCCTG GGATGCGACA
ACACGGCTCG ATCTGTTCGC CGACGAGGCG CGTTCGACGG ATGCGATCGG CGATTTCGCG
GGAAGCGCCG AGGCCAAACG CTATCGGCAA TTTTGCGCCG ACAGCCGGCG AATCTATCAG
ATCCTCGAAC GGCCATTCTT GCGCGCCACC GCACCGAGCC TGTTCGGACT GGTCACCGGA
AACGGGCTCG GCGGCCTGAT CGAACTGCGC AAGATCCGTC CCTTCACCAC GATGTGGAAT
GCGCTGGGTG ATTACTTCCA CGACCCGCGA CTGCGCCAAT TGTTTGGGCG GTATTCGACT
TATTGTGGAT CATCGCCGTT TCAGGCGCCG GCAACGCTGA TGCTGGTCGC CCATGTCGAA
CAGCAGGGCG TCTGGATCAT CGAAGGCGGC ATGCACGCGC TGGCCCGCGC GCTCGCCGAC
TGCGCGGCTT CGCTCGGCGC CACCATCCGC TACGAACAGG AAGTCCGTGA GATCATGGTG
TCGGGCGGCC ACGCCGCTGG CGTGATTCTC GCAAATGGCG AGCGGATCGA AGCGCAGTCG
GTGATCGTCA ACGCCGATGT CGGCGCGCTG CCCGGCGGCC TGTTCGGCGA ATCGGTGCAA
CGCGCGGTCG CGCCGATCGC TCCGAAGGTT CGGTCGCTGT CGGCGATGAC GTGGAGCATG
GTCGCGAAGA CCGATGGGTT TCCGCTCAGC CGGCACACGG TGTTCTTCTC GCGCGACTAT
GCGCGTGAGT TCACCGACAT CTTCAAGCGC GGCGAAATGC CAAGCGAGCC GACCGTCTAT
GTCTGCGGCC AGGATCGCAT CGACGACGAA GCAATGCTCG ACCAGGGCGG CGAGGAAGAA
CTGCTGGTGC TGGTCAACGC GCCGCCGGTC GGCGATCGCA AATCATTCGA CGAAACAGAG
ATCGCACGCT ATGCAGAGCG GACCTTCGGC GTCTTGGAGC GCTGCGGGCT ACGTATCCAA
CAGAAGCCCG GCAAAACCGA GGTGACGACG CCGGCGGATT TCAACCGCTT GTTTCCCGCG
ACCGGCGGCG CGCTTTACGG CCGCGCCTCC CATGGCTGGA CCGCATCTTT CGAGCGCCCC
GGCGCTCGCA CCAAGATTCC GGGCCTGTAT CTCGCGGGCG GCAGCACCCA TCCCGGCCCC
GGCGTGCCGA TGGCCGGCCT CTCCGGCCGC GCCGCCGCGG CGAGCCTGAT CGCCGATATC
GAGACCGAGC TGCAGGGGCT GAAGCCGTTG CTGCGGCCGG TCGCCACCTC AACCGAAGCG
AACAACCAAA CGTAA
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| Protein sequence | MRDQTGKNRV VVIGAGVAGL TSALALSARG LDVTVVERAA APGGKIREVG IGASRIDSGP
TVFTMRWVFE ELFASAGLDF ADHVRLRPLS VLARHAWDAT TRLDLFADEA RSTDAIGDFA
GSAEAKRYRQ FCADSRRIYQ ILERPFLRAT APSLFGLVTG NGLGGLIELR KIRPFTTMWN
ALGDYFHDPR LRQLFGRYST YCGSSPFQAP ATLMLVAHVE QQGVWIIEGG MHALARALAD
CAASLGATIR YEQEVREIMV SGGHAAGVIL ANGERIEAQS VIVNADVGAL PGGLFGESVQ
RAVAPIAPKV RSLSAMTWSM VAKTDGFPLS RHTVFFSRDY AREFTDIFKR GEMPSEPTVY
VCGQDRIDDE AMLDQGGEEE LLVLVNAPPV GDRKSFDETE IARYAERTFG VLERCGLRIQ
QKPGKTEVTT PADFNRLFPA TGGALYGRAS HGWTASFERP GARTKIPGLY LAGGSTHPGP
GVPMAGLSGR AAAASLIADI ETELQGLKPL LRPVATSTEA NNQT
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