Gene RPD_3758 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_3758 
Symbol 
ID4024274 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp4195201 
End bp4196343 
Gene Length1143 bp 
Protein Length380 aa 
Translation table11 
GC content65% 
IMG OID637963962 
ProductO-methyltransferase family protein 
Protein accessionYP_570880 
Protein GI91978221 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00542752 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGATTTCCT CGAGCCTGCG CGATCGGCTG CTCGGTTGGC GCGATTCGAT TCTGTCGAAT 
CCGCGCTTTC AGCGCTTTGC CGCGGTGTTT CCATTGACGC GGCGTGTCGC GCGGCGCCGC
GCCGCCGCGA TGTTCGATCT CGTCGCTGGC TTCGTCTATT CCCAAATCCT GCTGGCCTGC
GTGCAGTTGC GGCTGTTCGA TTTGCTTGCG GAGCGTCCTG CCAGCGTCGA CGAGCTCGCC
ACGCGACTGT CATTGCCGCG GGAATCGATG CAGATGCTGC TCGACGGAGC GACGGCGCTC
AAGCTGGTGC AGCCGCGTAG CCAGGGCCGC TACGGGCTCG GCCAGCTCGG CGCAGAACTG
TGCGGCAATC AAGGCGTGCT GGCGCTGGTC GAGCACCATG CGATGTTATA CCGCGACCTC
GCCGATCCTT TGGCCCTGCT GCGCGGGCCG CGCGGCGGTG GCGAACTCGC GGCGTATTGG
GCCTATGTCC GCGGCGAGCG ACCGGCCGAC CTCGGATCGG AGCAGGTCTC GTCCTACACC
GCGCTGATGG CGGCGTCGCA GCCGATGATT GCCCGCGAAG TGCTACATGC CTTCTCTTTC
CGGGCGCATC GCTGCCTGCT CGACGTCGGC GGCGGCGACG GATCGTTTTT GTCGGCTGTC
GCCGCGCAGA ATCCAGAGCT CCGCTGCATC CTGTTCGACT TACCGGCGGT CGCAGAGAAG
GCGGCAGAGC GGTTTCGGGT CACTGGACTG GCGGACCGGG CGACCGCGGT CGGCGGCAGC
TTCCGCACCG ATCGGCTGCC CGAAGGCGCC GACATCGTTT CGCTGGTGAG GGTCATTCAC
GACCACGACG ACGAGGTCGT GGCCGAGCTG CTGGACGCCG TCCATAACGC CCTCCCGGAT
CAGGGGAAAT TGCTGATCGC CGAGCCGATC GCCGGCCTGC CGGGCACGGA ATCGATCTCG
GATGCCTATT TCGCCTTTTA TCTGAGGGCG ATGGGAACCG GTAAAGCCAG GACGTTCGAG
CGGCTGCGCG ACCTGCTGGA AACAGCCGGA TTCACCCAGA TCGAGCTCCA TTCTGTGCCG
ATGCCCCTGG TGGCATCCGT GATTACCGCA ATCAAGCGCT CCAAATGTGT TAATCTGGCT
TGA
 
Protein sequence
MISSSLRDRL LGWRDSILSN PRFQRFAAVF PLTRRVARRR AAAMFDLVAG FVYSQILLAC 
VQLRLFDLLA ERPASVDELA TRLSLPRESM QMLLDGATAL KLVQPRSQGR YGLGQLGAEL
CGNQGVLALV EHHAMLYRDL ADPLALLRGP RGGGELAAYW AYVRGERPAD LGSEQVSSYT
ALMAASQPMI AREVLHAFSF RAHRCLLDVG GGDGSFLSAV AAQNPELRCI LFDLPAVAEK
AAERFRVTGL ADRATAVGGS FRTDRLPEGA DIVSLVRVIH DHDDEVVAEL LDAVHNALPD
QGKLLIAEPI AGLPGTESIS DAYFAFYLRA MGTGKARTFE RLRDLLETAG FTQIELHSVP
MPLVASVITA IKRSKCVNLA