| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_3754 |
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| Symbol | |
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| ID | 4024270 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | - |
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| Start bp | 4190097 |
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| End bp | 4191548 |
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| Gene Length | 1452 bp |
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| Protein Length | 483 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637963958 |
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| Product | chlorophyllide reductase subunit Z |
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| Protein accession | YP_570876 |
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| Protein GI | 91978217 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG2710] Nitrogenase molybdenum-iron protein, alpha and beta chains |
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| TIGRFAM ID | [TIGR01278] light-independent protochlorophyllide reductase, B subunit
[TIGR02014] chlorophyllide reductase subunit Z |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.00589159 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCTTGTCC TGGATCATGA TCGCGCCGGC GGTTATTGGG GCGCCGTCTA TGCCTTCACC
GCGGTGAAGG GCCTGCAGGT GATCATCGAC GGCCCGGTCG GCTGCGAGAA CCTGCCGGTC
ACCTCGGTGC TGCATTACAC CGACGCGCTG CCCCCGCACG AATTGCCGAT CGTCGTCACC
GGTCTCGGCG AAGACGAACT CGGCAAGCTC GGCACCGAAG GCGCGATGAA GCGCGCGCAC
CGCACGCTCG ACCCGTTCCT GCCTGCCGTG GTGGTGACAG GTTCGATCGC CGAAATGATC
GGCGGCGGCG TCACGCCCGA AGGCACCAAC ATCAAGCGCT TCCTGCCGCG CACCATCGAC
GAAGACCAGT GGCAGAGTGC TGACCGCGCC ATCGTCTGGC TGTGGAAAGA ATACGGCCCG
AAGAAGATTC CGGAGCGCAA GCCGCTGTCG CCGGACGTCA AGCCGCGGGT GAACATCATC
GGCCCGATCT ACGGCACTTT CAACATGCCG TCCGACCTCG CGGAAATCCG CCGCCTGATC
GAAGGCATCG GCGCCGAAGT CAACATGGTG TTTCCGCTCG GCTCGCACCT CGCCGATATT
CCGAAGCTGG TGAATGCCGA CGTCAACGTC TGCATGTACC GCGAGTTCGG CCGCCTGCTG
TGCGAGGCGC TGGAGCGGCC CTATCTGCAG GCGCCGATCG GGTTGCATTC AACCACGCGC
TTCCTGCGCA AGCTCGGCGA GCTCACGGGT CTCGATCCGG AGCCGTTCAT CGAGCGTGAG
AAGAACACCA CGATCAAGCC GCTGTGGGAC CTGTGGCGCT CGGTGACCCA GGACTTCTTC
GGCACTGCGA GCTTTGCGGT CGTCGCCACT GATACTTATG CCCGCGGCGT GCGAAATTTC
CTCGAGACGG AAATGGGCCT GCCGTGCACC TTCGCAGTGT CGCGCAAGGC CGGCGTGAAG
CCGGACAATG ACGCGGTTCG CACCGCGATT CGGCAGACTC CGCCGCTGAT TATGTTCGGT
AGCTACAACG AAAGAATGTA CCTCGCCGAA TCGGGCTCGC GCGCGATCTA CATCCCGGCG
TCGTTTCCGG GCGCGGTGAT CCGCCGCCAT CTCGGTACGC CGTTCATGGG CTACTCGGGC
GCGACCTATC TGGTGCAGGA AGTGTGCAAC GCGCTGTTCG ATGCGCTGTT CAACATCCTG
CCGCTCGGCA GCGATCTCGA TCGCGTCGAT CCGACTCCGG CGCGTCGTCA CGAAGAGCTG
CTCTGGAGCG ACGAAGCCAA GGCGCTGCTC GACGAAGTGC TCGAGGCGCA TCCGGTGCTG
GTGCGGATTA GCGCAGCAAA GCGTTTGCGC GACGCAGCTG AAAACAGCGC GCGCCGTGCC
GGCCAAGAGC AGGTGACGAA AGAATTTGTC AGTAAAGCAC GTGCGGCGCT CTTGGATGGG
CAGTCGGCGT GA
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| Protein sequence | MLVLDHDRAG GYWGAVYAFT AVKGLQVIID GPVGCENLPV TSVLHYTDAL PPHELPIVVT
GLGEDELGKL GTEGAMKRAH RTLDPFLPAV VVTGSIAEMI GGGVTPEGTN IKRFLPRTID
EDQWQSADRA IVWLWKEYGP KKIPERKPLS PDVKPRVNII GPIYGTFNMP SDLAEIRRLI
EGIGAEVNMV FPLGSHLADI PKLVNADVNV CMYREFGRLL CEALERPYLQ APIGLHSTTR
FLRKLGELTG LDPEPFIERE KNTTIKPLWD LWRSVTQDFF GTASFAVVAT DTYARGVRNF
LETEMGLPCT FAVSRKAGVK PDNDAVRTAI RQTPPLIMFG SYNERMYLAE SGSRAIYIPA
SFPGAVIRRH LGTPFMGYSG ATYLVQEVCN ALFDALFNIL PLGSDLDRVD PTPARRHEEL
LWSDEAKALL DEVLEAHPVL VRISAAKRLR DAAENSARRA GQEQVTKEFV SKARAALLDG
QSA
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