Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPD_3745 |
Symbol | |
ID | 4024261 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB5 |
Kingdom | Bacteria |
Replicon accession | NC_007958 |
Strand | - |
Start bp | 4182138 |
End bp | 4183340 |
Gene Length | 1203 bp |
Protein Length | 400 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637963949 |
Product | geranylgeranyl reductase |
Protein accession | YP_570867 |
Protein GI | 91978208 |
COG category | [C] Energy production and conversion |
COG ID | [COG0644] Dehydrogenases (flavoproteins) |
TIGRFAM ID | [TIGR02023] geranylgeranyl reductase [TIGR02032] geranylgeranyl reductase family |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 3 |
Fosmid unclonability p-value | 0.000410516 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAGCGAGA ACTCCGCGAT CTATGACGTC ATTGTCGTCG GAGGCGGTCC GTCCGGCGCC ACCGCAGCCT GTGATCTGGC GAGGGCCGGC AAGCGAGTGG TCCTGCTCGA CCGCGCCGGT CGCATCAAGC CGTGCGGCGG CGCGATCCCG CCGCGAGCGA TCCGCGATTT CGCGATCCCT GACAGCATGC TGGTGGCGAA GATCAATGCC GCGCGAATGG TTTCGCCGAG CGATGTCGAA GTCGACATGC CGATCGGCGA TGGCTTCGTC GGCATGGTCG ACCGCGAGCA TTTCGACGAG TGGCTGCGCA AACGCGCCGC GAGTGTCGGC GCCGAGCGCC GCACGGGGCT GTTCCGAAGT TTCACGCGAG ACGAAAGCGG CGTCAACACC GTTCACTACG AGGAGCGTCA GCCCGACGGC ACCATGCTGG ATCAAACGGT GCGGGCGCGG GCGATCATTG GCGCCGACGG CGCCGTGTCG GCGGTGGCGC GGCAGTTCCT GCCTGATGCC GATCGGGCGC CGTTCGTGTT CGCCTATCAT GAGATCATCA AGGCGCCGCA GCCGGGCCAG GCCGCTTACG AGAGCCGGCG CTGCGACGTG TACTATCAGG GCAAGGTGTC ACCTGACTTC TACGGCTGGG TGTTTCCGCA TGGTGACACT GTGAGCGTCG GCACCGGCTC GATGCACAAG GGATTCTCGC TTCGCGATTC GGTGGCCGAA CTGCGCAAGG CGACCGGGCT CGACGAAGTC GAGACCATCC GTAAAGAAGG CGCGCCGATT CCGCTTCACC CTCTTCCGCG CTGGGACGAT GGCCACAGCG TGCTGCTTGC CGGCGACGCC GCCGGCGTTG TGGCGCCGGC TTCGGGTGAG GGGATCTACT ACGCGCTGGT CGGTGGCCGT CTCGCGGCTG AAGCAGTCGG CGAATTCCTC GATACTGCGG ACGCCAAGGT GCTGAAGCTG GCGCGCAAGC GCTTCATGCG GGCGAACGGC TCGGTGTTCA GGATTCTCGG CCTGATGCAG TGGTACTGGT ACGCGAGCGA CAAGCGCCGT GAACAATTCG TTAGCATCTG CCGGGATCGC GACGTGCAGA AGCTGACCTG GGACGCCTAC ATGAACAAAA AGCTGGTGCG AGCCAAGCCG ATTGCCCATG TCCGGATATT CTTCAAGAAC CTCGCCCACA TGACGGGCCT GGCTTCAGTG TAA
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Protein sequence | MSENSAIYDV IVVGGGPSGA TAACDLARAG KRVVLLDRAG RIKPCGGAIP PRAIRDFAIP DSMLVAKINA ARMVSPSDVE VDMPIGDGFV GMVDREHFDE WLRKRAASVG AERRTGLFRS FTRDESGVNT VHYEERQPDG TMLDQTVRAR AIIGADGAVS AVARQFLPDA DRAPFVFAYH EIIKAPQPGQ AAYESRRCDV YYQGKVSPDF YGWVFPHGDT VSVGTGSMHK GFSLRDSVAE LRKATGLDEV ETIRKEGAPI PLHPLPRWDD GHSVLLAGDA AGVVAPASGE GIYYALVGGR LAAEAVGEFL DTADAKVLKL ARKRFMRANG SVFRILGLMQ WYWYASDKRR EQFVSICRDR DVQKLTWDAY MNKKLVRAKP IAHVRIFFKN LAHMTGLASV
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