Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPD_3744 |
Symbol | |
ID | 4024260 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB5 |
Kingdom | Bacteria |
Replicon accession | NC_007958 |
Strand | - |
Start bp | 4181654 |
End bp | 4182121 |
Gene Length | 468 bp |
Protein Length | 155 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637963948 |
Product | TspO/MBR family protein |
Protein accession | YP_570866 |
Protein GI | 91978207 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG3476] Tryptophan-rich sensory protein (mitochondrial benzodiazepine receptor homolog) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.651214 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 3 |
Fosmid unclonability p-value | 0.000360645 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | TTGAATCCGA TTTTCGTTGC TGCCGTCGTC GCGGTTCTCG TGGGATTGCT CGGCGGCTCT CTGACCGATA CCGGCATATG GTATCAAAGC CTGATCAAGC CATGGTGGCA GCCGCCCGAC TGGCTGTTCG GGCCTGCCTG GACAGTGATC TTCGCGCTCG CCGCGATGGC GGCGGCCTAT GCCTGGCGCG GCGCGCGAAC GCGGGCGCAA CGCGAATGGG TGATCGGACT GTTCGCCGCC AACGGCTTCT TCAACGTGAT GTGGAGCATG CTGTTCTTCA CGGTGCAGCG GCCGGATTGG GCGTTGATCG AAGTGCCGCT GCTGTGGCTA TCGGTGCTGA TCGGGATCGT GGTGTTCTGG CGCGGTGCGC GGACCGCAAG CTACTATCTG ATACCTTATC TGGTCTGGGT GACGTTCGCG ACATATCTGA ACTGGACGGT GGTGCGGCTC AACGCCCCGT TCTCATGA
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Protein sequence | MNPIFVAAVV AVLVGLLGGS LTDTGIWYQS LIKPWWQPPD WLFGPAWTVI FALAAMAAAY AWRGARTRAQ REWVIGLFAA NGFFNVMWSM LFFTVQRPDW ALIEVPLLWL SVLIGIVVFW RGARTASYYL IPYLVWVTFA TYLNWTVVRL NAPFS
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