| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_3724 |
|---|
| Symbol | |
|---|
| ID | 4024240 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris BisB5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007958 |
|---|
| Strand | - |
|---|
| Start bp | 4159005 |
|---|
| End bp | 4160216 |
|---|
| Gene Length | 1212 bp |
|---|
| Protein Length | 403 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 637963928 |
|---|
| Product | 5-aminolevulinate synthase |
|---|
| Protein accession | YP_570846 |
|---|
| Protein GI | 91978187 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0156] 7-keto-8-aminopelargonate synthetase and related enzymes |
|---|
| TIGRFAM ID | [TIGR00858] 8-amino-7-oxononanoate synthase
[TIGR01821] 5-aminolevulinic acid synthase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.00666631 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 4 |
|---|
| Fosmid unclonability p-value | 0.00153498 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGAATTACG AAGCCTATTT CCGCCGTCAA CTTGACGGCC TCCATCGTGA AGGCCGGTAT
CGGGTTTTCG CTGATCTGGA ACGTCATGCC GGCTCGTTCC CGCGCGCCAC GCACCACCGG
CCTGAGGGCG CCGGCGATGT GACGGTGTGG TGCTCCAACG ATTATCTCGG CATGGGCCAG
CACCCGGCGG TGCTGACGGC CATGCACGAG GCGCTGGACA GCTGCGGCGC CGGCGCCGGC
GGCACCCGCA ACATCGCGGG TACCAACCAC TATCACGTGC TGCTGGAGCA GGAGCTCGCC
GCTCTGCATG GCAAGGAATC CGCCCTGCTG TTCACCTCCG GTTACGTTTC GAACTGGGCG
TCGTTGTCGA CGCTGGCGTC GCGGATGCCC GGCTGCGTGA TCCTGTCGGA CGAACTCAAT
CATGCTTCGA TGATCGAGGG CATTCGTCAC AGCCGCAGCG AGACCCGAAT TTTCGCGCAC
AATGATCCGC GCGACCTCGA GCGCAAGCTC GCCGATCTCG ACCCGCACGC GCCGAAGCTG
GTCGCCTTCG AGTCGGTGTA TTCGATGGAC GGCGACATCG CGCCGATCGC CGAAATCTGC
GACGTCGCCG ACGCGCATAA CGCGATGACG TATCTCGATG AAGTCCACGG CGTCGGCCTG
TACGGCCCGA ATGGCGGTGG CATTGCCGAT CGCGAGGGCA TCAGCCATCG CCTCACCATC
ATCGAAGGCA CGCTGGCGAA AGCGTTCGGC GTGGTCGGCG GCTACATCGC CGGCTCCTCG
GCCGTCTGCG ATTTCGTCCG CAGCTTCGCC TCGGGCTTCA TCTTCAGCAC CTCGCCGCCT
CCGGCGGTCG CTGCAGGCGC GCTGGCCAGC ATCCGCCATC TGCGCGCCAG TTCGGCGGAG
CGCGAGCGTC ATCAGGATCG GGTGGCGCGG CTGCGCGCCA GGCTCGATCA GGCCGGCGTG
GCCCACATGC CGAACCCGAG CCATATCGTT CCGGTCATGG TCGGCGATGC CGCGCTGTGC
AAGCAGATCA GCGACGAGTT GATCAGCCGG TACGGCATTT ATGTGCAGCC GATCAACTAT
CCGACCGTGC CGCGCGGCAC CGAGCGCCTT CGGATCACGC CGTCACCGCA GCACACCGAT
GCCGACATCG AGCATCTGGT GCAGGCGCTC AGTGAAATCT GGACCCGCGT CGGTCTCGCC
AAGGCGGCCT GA
|
|---|
| Protein sequence | MNYEAYFRRQ LDGLHREGRY RVFADLERHA GSFPRATHHR PEGAGDVTVW CSNDYLGMGQ
HPAVLTAMHE ALDSCGAGAG GTRNIAGTNH YHVLLEQELA ALHGKESALL FTSGYVSNWA
SLSTLASRMP GCVILSDELN HASMIEGIRH SRSETRIFAH NDPRDLERKL ADLDPHAPKL
VAFESVYSMD GDIAPIAEIC DVADAHNAMT YLDEVHGVGL YGPNGGGIAD REGISHRLTI
IEGTLAKAFG VVGGYIAGSS AVCDFVRSFA SGFIFSTSPP PAVAAGALAS IRHLRASSAE
RERHQDRVAR LRARLDQAGV AHMPNPSHIV PVMVGDAALC KQISDELISR YGIYVQPINY
PTVPRGTERL RITPSPQHTD ADIEHLVQAL SEIWTRVGLA KAA
|
|---|
| |