| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_3717 |
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| Symbol | |
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| ID | 4024233 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | + |
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| Start bp | 4150436 |
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| End bp | 4152577 |
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| Gene Length | 2142 bp |
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| Protein Length | 713 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637963921 |
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| Product | oligopeptidase B |
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| Protein accession | YP_570839 |
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| Protein GI | 91978180 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1770] Protease II |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.00771763 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCAACGAG ATCTGTCCAT GACCCAGTCC CCACCTCGCG ACGCCCTCAC GCCGCCCGCA
GCGCCGCGTC GTCCGCACGC CTTCACCACC CACGGCATCA CGCTGAATGA CGACTATGCC
TGGCTGAAGG ACCCGAACTG GCAGGACGTG TTGCGCGATC CGTCGCTCCT CGATCCCGAC
ATCCGCAGTT ATCTCGAAGC CGAGAACAGT TACACAGACG GCCTCCTCGG CCATACCGGC
GCGCTGCAGA AGAAGCTCGT CGCGGAGATG CGCGGGCGGA TCAAGGAAGA CGATTCCAGC
GTACCGCTGC CGGACGGACC CTATGCGTAT TTGCGGAAGT ATCGCGAAGG CGGCCAGCAT
CCGTTGTATG GGCGCACGCC GCGCGACGGC GATGAGGTCG ACGTCATCCT CGACGGCGAC
GAGCTGGCGA AGGGAACCGA GTACTTCCAG TTCGGCGGGC GGCGGCATTC GCTCGACCAT
AAACTCGAAG CGTGGAGCGC CGACACCGCC GGCTCGGAAT ATTACACCAT CCGGGTGCGC
GACTGGGCGA CCAAGCAGGA CCTGCCGGAT GTGGTCGAGG AGACCGACGG CGGCGTGGTG
TGGACGCTGG ACTCGCGCGC CTTCTTCTAC GTCAAGCTCG ACGACAACCA CCGGCCGATG
CAAGTCTGGA AGCACACGCT CGGGACTGCG CAGGCAGACG ACGTCCTGGT GTTTCAGGAA
CAGGATGCAG GCTGGTTCAC CCACATCCAC GAGAGTTCCA GCGGCCGGTT CTGTGTGATC
GCGGGCGGCG ACCACGAAAC CTCCGAACAA CGGCTGATCG ATCTCGCCGC ACCCGACGCG
GAGCCGCGGT TGGTCGCCGC GCGCGAGCCC GGCGTGCAGT ACTCACTCGC CGACCGCGGC
GACGAGCTGT TCATCCTCAC CAATGCGGAC GACGCCATCG ACTTCAAGAT CGTCACCGCG
CCGCTGGCCG CGCCGACACG CGACAACTGG CGCAACTTGA TCCCGCATCG CGAAGGCATC
TACATCATCG ACTTCGATCT GTTCGCCGGC CACATGATGC GGCTGGAGCG CGCCAACGCG
CTGCCGTCGG TGACAATCCG CGATCTCGCC ACCGGAAGCG AGCACGCCAT CGCTTTCGAC
GAGGCCGCCT ATTCGCTCTC CGCCTCCGGC GGCTACGAGT TCGACACCAC CAACATGCGG
TTTTCCTATT CGTCGATGAC GACGCCGTCG GAAGTCTACG ACTACGACAT GGCGACGCGC
GCGCGCGTGT TGCGCAAGCG CCAGGAAATC CCCTCGGGCC ACAACCCGGC AGACTACGTC
ACCACGCGGA TCATGGCGAA AGCCGACGAC GGCGCCGAGG TGCCGGTGTC GCTGCTGCAT
CGCAAGGGTT TGAAACTGGA CGGCACTGCG CCGCTGTTGC TCTACGGCTA TGGCTCCTAC
GGCCACGCGA TGCCGGCGGG CTTTTCCGCT AACGCATTGT CGCTGGTCGA TCGCGGCTTC
GTCTACGCCA TCGCTCATAT CCGCGGTGGC GCCGACAAGG GCTGGGGCTG GTATCTGGAC
GGCAAACGCG ACAAGAAGAC CAACTCGTTC GACGATTTCG CCGCCTGCGC CCGCGCGCTG
ATCGCAGCCC GTTACACCTC GGCGAAACGC ATCGTCGCTC ACGGCGGCAG CGCCGGCGGC
ATGTTGATGG GCGCGGTTGC CAACCGCGCC GGCGAGTTGT TCGCCGGCAT CGTCGCCGAA
GTGCCGTTCG TCGACGTGCT GAACACCATG CTCGACGACA CGCTGCCGCT GACGCCGCCG
GAATGGCCCG AATGGGGCAA TCCGATCAAG AGCGAAGCCG ACTTCAAGAC CATCCTGTCG
TATTCGCCTT ACGACAACGT CGCGGCCAAG GACTATCCGG CGATCCTGGC GATGGGCGGC
CTGACCGATC CGCGCGTGAC CTATTGGGAG CCGGCGAAAT GGGTGGCGCG GCTGCGCGCC
TCCATGACCG GCGGCGGCCC GGTTGCGCTG CGCATCAACA TGGGCGCCGG CCATGGCGGC
GCGTCCGGCC GATTCAGCCG GCTCGACGAG GTGGCGATCG TTTATGCGTT CGCGCTGTGG
GCGGTCGGGC TGGCTGACGC GCCGCGCGAA AACGTGGCAT AA
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| Protein sequence | MQRDLSMTQS PPRDALTPPA APRRPHAFTT HGITLNDDYA WLKDPNWQDV LRDPSLLDPD
IRSYLEAENS YTDGLLGHTG ALQKKLVAEM RGRIKEDDSS VPLPDGPYAY LRKYREGGQH
PLYGRTPRDG DEVDVILDGD ELAKGTEYFQ FGGRRHSLDH KLEAWSADTA GSEYYTIRVR
DWATKQDLPD VVEETDGGVV WTLDSRAFFY VKLDDNHRPM QVWKHTLGTA QADDVLVFQE
QDAGWFTHIH ESSSGRFCVI AGGDHETSEQ RLIDLAAPDA EPRLVAAREP GVQYSLADRG
DELFILTNAD DAIDFKIVTA PLAAPTRDNW RNLIPHREGI YIIDFDLFAG HMMRLERANA
LPSVTIRDLA TGSEHAIAFD EAAYSLSASG GYEFDTTNMR FSYSSMTTPS EVYDYDMATR
ARVLRKRQEI PSGHNPADYV TTRIMAKADD GAEVPVSLLH RKGLKLDGTA PLLLYGYGSY
GHAMPAGFSA NALSLVDRGF VYAIAHIRGG ADKGWGWYLD GKRDKKTNSF DDFAACARAL
IAARYTSAKR IVAHGGSAGG MLMGAVANRA GELFAGIVAE VPFVDVLNTM LDDTLPLTPP
EWPEWGNPIK SEADFKTILS YSPYDNVAAK DYPAILAMGG LTDPRVTYWE PAKWVARLRA
SMTGGGPVAL RINMGAGHGG ASGRFSRLDE VAIVYAFALW AVGLADAPRE NVA
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