| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_3715 |
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| Symbol | |
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| ID | 4024231 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | - |
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| Start bp | 4146931 |
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| End bp | 4149261 |
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| Gene Length | 2331 bp |
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| Protein Length | 776 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637963919 |
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| Product | carbon-monoxide dehydrogenase |
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| Protein accession | YP_570837 |
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| Protein GI | 91978178 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1529] Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL homologs |
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| TIGRFAM ID | [TIGR02416] carbon-monoxide dehydrogenase, large subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.264219 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACATTC TCCCCGGCTC CATGCGGTTC GGTGCGGGTC AGCCCGTCAA GCGTCTCGAG
GATCAGCGCC TGCTCACCGG GCACGGCCTC TATCTCGACG ACAAGCCCGC CGACGGCGCG
CTGTGGCTGG TGGTGCTGCG CTCGCCTCAT GCGCACGCGA AGATCGTTGC GATCGACGGT
GAGGCGGCGC GGGCGATGCC GGGCGTCGAG TCCGTGCTGA CCGGAGCCGA TCTGGTCGCC
GACGCGGTCG GCACGATCCC GACTCTGCCG ATCTTCAAGC GGCCGGACGG CTCGCCAATG
ACGCTGCCGC CACGGCGTCT GCTCGCGCAT GAGATCGTCC GTTTCGTCGG CGAGCCCGTC
GCCGCCGTCA TCGCGTCGTC GCAAGCCGCC GCGCAAGCGG CCGCCGAGGC TGTCGTCGTC
GAGTACGAAG AGCTTCCCGC CGTGACCGAT CCGACCGCGG CAATCCAGCC CGGCGCGCCG
GTCGTGTACG ACACCGCTCC CGACAACATC GTCGCGGCGA TGAGCTATGG CGATGCCGCC
AAGGTCGATG AGGCCTTCGC CAAAGCCGCG CACACGGTCT CGCTCGATAT CGTCAGCCAG
CGGCTGATCC CTTCCGCGAT GGAGCCGCGC GCGACCATCG CCGAGATCGA GAAGAAGACC
GGCCGGCTGA TCCTGCACGT GCAGTCGCAG ACGCCGGCGA CGACGCGCGA CACGCTCGCC
GACGCCATCC TGAAGCGGCC GAAGGACAGC ATTCAGGTTC TGGTCGGCGA CATCGGCGGC
GGTTTCGGCC AGAAGACCGG CCTCTATCCG GAGGATGGTC TCGTCGCCTA CGCGGCGGTC
AAGCTCAACC GCAAGGTGCG ATGGCGCGGC GACCGGACCG ACGAATTCGT CGGCGGCACC
CATGGCCGCG ACCTGACCTC GACGGCGTCG ATTGCGCTCG ACGCCAAGGG CCGCGTGCTG
GCCTATCGCG TGTCGTCGAT CGGCGGCACC GGCGCCTATC TCGCTGGCGC CGGCGTGATT
ATTCCGCTGG TGCTCGGCCC GTTCGTGCAG ACCGGCGTCT ACGATCTGCC GCTGGTGCAT
TTCGACATCA AGGCGGTGTT GACCCACACC GCGCCGGTCG GAGCCTATCG CGGGGCCGGT
CGCCCCGAGG CGGTGTACAT CATCGAGCGG CTGATGGACG CCGCTGCGCG ACAGCTCGGC
ATGGACCCGC GCGCGATCCG CAAGGTCAAT TACATCAAGC CGTCGCAGCT GCCTTACACC
AACGCGGTCG GGCAGGTGTA CGATAGCGGC GCCTTCGCCC ATATGATGCA GCGCGCCGCC
GAACTGTCCG ACTGGGTCGG CTTCAAGGCG CGCAAGAAGG AAGCCGCGAA GAAGGGCCTG
CTCTACGGCC GCGGCGTCAC AAGCTACATC GAATGGACCG GCGGCCGCGC GCATACCGAA
AAGGTGAGCC TGCACGCCAC GGCGGAAGGC CGCATCGTGC TGCATTCCGG CACGCAGGCG
ATGGGGCAGG GGCTCGAGAC CACCTACACC CAGATGATCG CGCAGGCGCT CGACATTCCG
ATGGATCAGA TCGACGTGGT GCAGGGCAAC ACCGATCTTG CGCAGGGTTT CGGCAGCGTC
GGCTCGCGCT CGCTGTTCGT CGGCGGCACT GCGGTCGCGG TGTCGACCGT CGACATGATC
GCCAAGGCGC GCGAGAAGGC GGCGAACATC CTCGAAGCCT CGGTCGAGGA CATCGAGTAT
TCCGGCGGCA CGCTGACGAT CGCCGGCACC GATCGCAAGA TCAGCCTGTT CGAGATCGCC
GCCAAGGAGA ACGGCGCCAA GCTCAGCGTC GACAGCACCG GCGAAGTGGA CGGCCCGAGC
TGGCCGAACG GCGCGCATAT CTGCGAGGTC GAGGTCGATC CAGAGACGGG TGTGTCGCGC
GTGGTGCGCT ACACCACGGT CGATGACGTC GGCAATGCGG TCAATCCGAT GTTGGTGGCC
GGCCAGATCC ACGGTGGCGT CGCGCAGGGG GTTGGACAAG CGCTGTACGA AGGCGCGTCC
TACAATGACG ACGGCCAGTT GGTGACCGCG AGCTATCAGG ACTACTGCAT CCCGCGGGCC
GACAATCTGC CGCCGATCTC GGTGACGCTC GATCCTTCGG CGCCGTGCCG GACCAATCCG
CTCGGCGCCA AGGGCTGCGG CGAATCCGGC GCGATCGGCG GTCCCCCTTG CGTGGTCCAT
GGCGTGCTCG ATGCGCTGGC ACCGCTCGGC GTCACCGCGC TGAACACGCC GCTGACGCCG
GAAAAGGTGT GGCGCGCAAT TCAGGAAGCC AAAGCTGCGC AGGCGGCCTG A
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| Protein sequence | MNILPGSMRF GAGQPVKRLE DQRLLTGHGL YLDDKPADGA LWLVVLRSPH AHAKIVAIDG
EAARAMPGVE SVLTGADLVA DAVGTIPTLP IFKRPDGSPM TLPPRRLLAH EIVRFVGEPV
AAVIASSQAA AQAAAEAVVV EYEELPAVTD PTAAIQPGAP VVYDTAPDNI VAAMSYGDAA
KVDEAFAKAA HTVSLDIVSQ RLIPSAMEPR ATIAEIEKKT GRLILHVQSQ TPATTRDTLA
DAILKRPKDS IQVLVGDIGG GFGQKTGLYP EDGLVAYAAV KLNRKVRWRG DRTDEFVGGT
HGRDLTSTAS IALDAKGRVL AYRVSSIGGT GAYLAGAGVI IPLVLGPFVQ TGVYDLPLVH
FDIKAVLTHT APVGAYRGAG RPEAVYIIER LMDAAARQLG MDPRAIRKVN YIKPSQLPYT
NAVGQVYDSG AFAHMMQRAA ELSDWVGFKA RKKEAAKKGL LYGRGVTSYI EWTGGRAHTE
KVSLHATAEG RIVLHSGTQA MGQGLETTYT QMIAQALDIP MDQIDVVQGN TDLAQGFGSV
GSRSLFVGGT AVAVSTVDMI AKAREKAANI LEASVEDIEY SGGTLTIAGT DRKISLFEIA
AKENGAKLSV DSTGEVDGPS WPNGAHICEV EVDPETGVSR VVRYTTVDDV GNAVNPMLVA
GQIHGGVAQG VGQALYEGAS YNDDGQLVTA SYQDYCIPRA DNLPPISVTL DPSAPCRTNP
LGAKGCGESG AIGGPPCVVH GVLDALAPLG VTALNTPLTP EKVWRAIQEA KAAQAA
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