Gene RPD_3714 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_3714 
Symbol 
ID4024230 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand- 
Start bp4146241 
End bp4146855 
Gene Length615 bp 
Protein Length204 aa 
Translation table11 
GC content62% 
IMG OID637963918 
Producthypothetical protein 
Protein accessionYP_570836 
Protein GI91978177 
COG category[S] Function unknown 
COG ID[COG1704] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.774184 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.302719 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCAGAC TTCTGACGGT GCTGGCGGCG CTCGCCACAC TCAGCCTGAC CAATTGCGGC 
TACAACACCA TCCAGAGCGA AGACCAGGAG GTGAAGTCGA CCTGGTCGGA GGTGGTCAAC 
CAGTATCAGC GCCGCGCCGA TCTGGTTCCC AATCTGGTGA ATTCGGTGAA AGGTTTCGCG 
CAGCAGGAGA AGGACGTTCT GCTCGGCGTC ACCAACGCAC GCGCCAAGGT CGGCAGCGTG 
CAGGCCACGC CCGAGGTGCT GAACGATCCG GCGGCTTTCC AGAAGTTCCA GGCGGCGCAG 
GGCGAGCTTT CCAGTGCGCT GTCGCGCCTC CTGGTGGTGA CCGAGAATTA TCCGCAGCTC 
AAGTCGGACG CGCTGTTCAG CAATCTGATG GCGCAGCTCG AAGGCACCGA GAACCGCATC 
ACCGTGGCGC GCAACCGCTA CATCAAGGCG GTGCAGGCCT ACAACGTGAC GGTGCGATCG 
GTCCCGACCA ATTTCACCGC GATGATGTTC GGCTACAAGG AGAAGCCGAA CTTCACCGTC 
GAGAATGAGA AGGACATCTC GACCGCGCCC AAGGTCGATT TCAATCCGAC CCCGGCCCCA 
GCGCCGGCGA AGTAA
 
Protein sequence
MRRLLTVLAA LATLSLTNCG YNTIQSEDQE VKSTWSEVVN QYQRRADLVP NLVNSVKGFA 
QQEKDVLLGV TNARAKVGSV QATPEVLNDP AAFQKFQAAQ GELSSALSRL LVVTENYPQL 
KSDALFSNLM AQLEGTENRI TVARNRYIKA VQAYNVTVRS VPTNFTAMMF GYKEKPNFTV 
ENEKDISTAP KVDFNPTPAP APAK