Gene RPD_3713 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_3713 
Symbol 
ID4024229 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp4145311 
End bp4146216 
Gene Length906 bp 
Protein Length301 aa 
Translation table11 
GC content69% 
IMG OID637963917 
Producthypothetical protein 
Protein accessionYP_570835 
Protein GI91978176 
COG category[R] General function prediction only 
COG ID[COG1512] Beta-propeller domains of methanol dehydrogenase type 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.915027 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.325884 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGGGTGG CGCGGGCGTC GATGCTCGCG GCGCTGCTGT GCTTGGCGGT CGCGGCCTTC 
GCCGCGGTCG CGCAGGCGCA GCTCGCGGTG CCGCAGCTCA CCGGCCGCGT GGTCGATCAG
ACCCGCACGC TGTCCGCCGA CGCGATTGCG CGGCTCGATC AGAAACTGAA AGCCTTCGAG
GCGAAGAAGG GCAGTCAGAT CGCGGTATTG ATCGTACCGA CGACGCAGCC GGAGGCGATC
GAGCAGTTTT CGATTCGCGT CGCCGAGGCC TGGAAGATCG GCCGCAAGAA GGTCGATGAC
GGCGCGATCC TGCTGGTCGC GAAAGGCGAT CGCAAGCTGC GGATCGAGGT CGGCTACGGC
CTCGAGGGCG CGCTGCCCGA CGTCACCGCC AAGCGCATCA TCGACGAGAT CATCACGCCG
AAGTTCAAGA CCGGCGATTT CGAGGGCGGC ATCGAGGCCG GAATCGACCG CATGGTCAGC
GTGACCGACG GCGAGCCGCT GCCCGAGCCC GAGCCGCAGC ACGAATGGTC GCCGGAGTCG
TTCGATCAAT TGAGCGGCTG GGCGGTCCCG CTGATCTTCG GCACGCTGTT CGTGAACGGC
TTTCTGCAGA GCCTGTTCGG CCGGATGGCG GCTTCGGCGG TGACCGGCGG CGTCATCGGC
GGCGTCGCAT GGATCTTCGG GCTCGGCTGG ATGATCGCGC TGTTCGCCGG CTTTGCGGCG
TTCCTGTTCG CGATGTTCGT CGATCTGTTC AGCGGGGGCG GATCCGGCTT CGGTTCGGGT
CGGCGCCGCG GCGGCGGGGT TTTCCCCGGC GGCTCGTGGT CCGGCGGATC GAGCGGCTCG
AGCGGTGGCG GCTTCAGCGG CGGCGGCGGT TCCTTCGGGG GCGGCGGCGC CTCTGGAAGC
TGGTGA
 
Protein sequence
MRVARASMLA ALLCLAVAAF AAVAQAQLAV PQLTGRVVDQ TRTLSADAIA RLDQKLKAFE 
AKKGSQIAVL IVPTTQPEAI EQFSIRVAEA WKIGRKKVDD GAILLVAKGD RKLRIEVGYG
LEGALPDVTA KRIIDEIITP KFKTGDFEGG IEAGIDRMVS VTDGEPLPEP EPQHEWSPES
FDQLSGWAVP LIFGTLFVNG FLQSLFGRMA ASAVTGGVIG GVAWIFGLGW MIALFAGFAA
FLFAMFVDLF SGGGSGFGSG RRRGGGVFPG GSWSGGSSGS SGGGFSGGGG SFGGGGASGS
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