Gene RPD_3712 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_3712 
Symbol 
ID4024228 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp4144800 
End bp4145297 
Gene Length498 bp 
Protein Length165 aa 
Translation table11 
GC content67% 
IMG OID637963916 
Producthypothetical protein 
Protein accessionYP_570834 
Protein GI91978175 
COG category[S] Function unknown 
COG ID[COG3762] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.298922 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGCATCC GGCGTATCGG CAAGCATCTG ATCACCAGCC GCAGGCTGGT GCAGAAGGCG 
TTTCCCCCGA CCGCGCTCGA CGCGATCGAG CGCGCGATCA GCGCCAGCGA AGCCCAGCAC
GCCGGGCAGA TCCGCTTCGT GGTGGAAGGC GCGCTCGACG GCGCGCCGCT GTTCCGCGAC
CAGCCGGCGC GGGAGCGCGC GCTCGATGTG TTTTCGCAAC TGCGGATCTG GGACACCGAG
CACAATAACG GCGTGCTGAT CTATCTCTTG CTCGCCGACC GCGACGTCGA GATCGTCGCC
GACCGCGGCA TCGACGCGCG GGTCGGGGCT GCCGCATGGG AAGGCATCTG CCGCGAGATG
GAAAGCGCTT TTCGCGAAGG CCGCTTCGAA GCCGGCGTGC TGCGCGGCAT CGATCTGATT
ACCATGCATC TGGCGGCGCA TTTCCCGAAA GAAGACCCAG GCGACAACGA ACTCCCCGAC
GCGCCAGTCG TGGTCTGA
 
Protein sequence
MGIRRIGKHL ITSRRLVQKA FPPTALDAIE RAISASEAQH AGQIRFVVEG ALDGAPLFRD 
QPARERALDV FSQLRIWDTE HNNGVLIYLL LADRDVEIVA DRGIDARVGA AAWEGICREM
ESAFREGRFE AGVLRGIDLI TMHLAAHFPK EDPGDNELPD APVVV