Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPD_3712 |
Symbol | |
ID | 4024228 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB5 |
Kingdom | Bacteria |
Replicon accession | NC_007958 |
Strand | - |
Start bp | 4144800 |
End bp | 4145297 |
Gene Length | 498 bp |
Protein Length | 165 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 637963916 |
Product | hypothetical protein |
Protein accession | YP_570834 |
Protein GI | 91978175 |
COG category | [S] Function unknown |
COG ID | [COG3762] Predicted membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.298922 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGCATCC GGCGTATCGG CAAGCATCTG ATCACCAGCC GCAGGCTGGT GCAGAAGGCG TTTCCCCCGA CCGCGCTCGA CGCGATCGAG CGCGCGATCA GCGCCAGCGA AGCCCAGCAC GCCGGGCAGA TCCGCTTCGT GGTGGAAGGC GCGCTCGACG GCGCGCCGCT GTTCCGCGAC CAGCCGGCGC GGGAGCGCGC GCTCGATGTG TTTTCGCAAC TGCGGATCTG GGACACCGAG CACAATAACG GCGTGCTGAT CTATCTCTTG CTCGCCGACC GCGACGTCGA GATCGTCGCC GACCGCGGCA TCGACGCGCG GGTCGGGGCT GCCGCATGGG AAGGCATCTG CCGCGAGATG GAAAGCGCTT TTCGCGAAGG CCGCTTCGAA GCCGGCGTGC TGCGCGGCAT CGATCTGATT ACCATGCATC TGGCGGCGCA TTTCCCGAAA GAAGACCCAG GCGACAACGA ACTCCCCGAC GCGCCAGTCG TGGTCTGA
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Protein sequence | MGIRRIGKHL ITSRRLVQKA FPPTALDAIE RAISASEAQH AGQIRFVVEG ALDGAPLFRD QPARERALDV FSQLRIWDTE HNNGVLIYLL LADRDVEIVA DRGIDARVGA AAWEGICREM ESAFREGRFE AGVLRGIDLI TMHLAAHFPK EDPGDNELPD APVVV
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