| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_3704 |
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| Symbol | |
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| ID | 4024220 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | + |
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| Start bp | 4133783 |
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| End bp | 4135561 |
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| Gene Length | 1779 bp |
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| Protein Length | 592 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637963908 |
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| Product | ferredoxin |
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| Protein accession | YP_570826 |
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| Protein GI | 91978167 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2114] Adenylate cyclase, family 3 (some proteins contain HAMP domain) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.755835 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGAGCA AGCGAACGAC GACCGACCGA ACCCGCGACG CCGACGAGCA GCGCCCGCGC
CATCTCGCCT TTCTGCGCGG CATCGGCCTG CGCCAGGTCC GGATGTTCAC CGGGCTGGTG
CTGTTCGCCT ATCTACTCAG CCATTTCCTC AATCATGCGC TCGGCAACAT CTCACCCGAG
GCGCTGCAGG CCGGCGTGGA ATGGCATCTT GAGATCTGGC AGTTCCTGCC GGTGGCGATC
CTGTTCTACG GCTCGGTCGC AACCCACGCG GGACTCGGGC TGTGGGCGCT GTATCAGCGC
CGCCGGTTCC GCTGGCGGAC GATCGAGCCG CTGCAGCTCT TGCTCGGCCT CAGCGTGCCG
CTGCTGATCT ACGGCCATGT GATCGGGCTG CGGCTCAGCA ACGCGCTGTA CGACATCGAC
AAGCTCTATC CGCAGGTGTT CTACGCCTAT TGGGTCGCGG CGCCGCCCTA CCGGGTGTGG
CTGATGGTGC TGGTGATGCT GGTCGCGTGG ACCCATGGCT GCATCGGTCT TTACGTCTGG
CTGCGGATCA AGCCGATGGC CCGCAAGGCG ATGCCGTGGC TACTCGCCGT CGCGGTGCTG
GTTCCGACGC TGGCGCTGCT CGGCTTCTAC CAAGGCGGCC GCGAGACGAT CCGCGATTCG
TCTTCGCGGG GATGGCAGGA AAAAAACCTG TCGGTGAAGC AGCTCGGCAC CCTGGCGCAG
CAGGCAACGC TCGACCGGGT CGGCGAAGCG TTCGTGATCG GCTATCTCGG GCTGATCGGG
CTCGCGCTGA TCGCTCGCGC CGCGCGCGGA CTGAACGAGC GGCGCGGCGG AATGATCCGG
CTGACCTACG GCGCCGACCG CATGATCCGG GTGCCGAAAG GGCTGAGCGT GCTCGAGGCG
AGCCTGCGTC ACAACATTCC GCACGCCAGC ATCTGCGGCG GCCGCGCCCG CTGCTCGACC
TGCCGCATCC GCGTGATCGG CAATCCCGCC GACCTGCCCC CGCCGTCGAG CCGCGAGGCG
TTCGTGCTGG ACAGCGTCGG CGCCGGCGAC GATCCCACCA TCCGCCTCGC CTGCCAGCTG
CGTCCGACCC ACGATCTCGC CTTCATGCCG GTTTTTCCCC CGCGCAACGC CGCGGCGGCG
CGGCTCGCGG CGCGTGCGGC GCGGGTTGGC GAGGAGCGCT ACCTCGTCAG CATGTTCGTC
GATCTACGCG GCTCGACCAA GATCGCCGAG ACGCGGCTGC CGTTCGACAC CGTGTTCATC
GTCAACCGCT TCCTCGGTGC GGTGTCGCGC GCCGTGATCG CCAGCGGCGG ACAGCCCAAC
CAGTTCATCG GCGACGGCGT GCTGGCGTTG TTCGGCCTTG ACGACACGCC GCGCGAAGCC
TGCCGCAATG CAATCCGCGC CGCCGCGGCG ATCGCCGCCT CGGTCGACGA ACTCAACGGC
TTCATCGGCC ACGACCTCCC CGAGCCGATC CGCTTCGGCA TCGGCCTCCA TGGCGGCGAA
GTCATCCTCG GCGAGATCGG CTATCGCGAT CACATGGTGT TCACCGCGCT CGGCGACTCG
GTCAACGTCG CAGCAAGGCT GCAGGACATG ACCAAAGCGC TCGGCTGCGA GACATTGTTG
TCCGACGAGG TGCGCGAGAC TGCGGGCGTC GCCGCCGACC AACTGCCGAC CCAGCAAGTC
GAGATCCGCG GCCGCGTCGA ACCGATGCTG GTCTGCCCGA TCGTGCAATC GCGCGACCTC
GCCGCAGCGC TCGACCAAAG CGAGCTGATG TTCGCCTGA
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| Protein sequence | MPSKRTTTDR TRDADEQRPR HLAFLRGIGL RQVRMFTGLV LFAYLLSHFL NHALGNISPE
ALQAGVEWHL EIWQFLPVAI LFYGSVATHA GLGLWALYQR RRFRWRTIEP LQLLLGLSVP
LLIYGHVIGL RLSNALYDID KLYPQVFYAY WVAAPPYRVW LMVLVMLVAW THGCIGLYVW
LRIKPMARKA MPWLLAVAVL VPTLALLGFY QGGRETIRDS SSRGWQEKNL SVKQLGTLAQ
QATLDRVGEA FVIGYLGLIG LALIARAARG LNERRGGMIR LTYGADRMIR VPKGLSVLEA
SLRHNIPHAS ICGGRARCST CRIRVIGNPA DLPPPSSREA FVLDSVGAGD DPTIRLACQL
RPTHDLAFMP VFPPRNAAAA RLAARAARVG EERYLVSMFV DLRGSTKIAE TRLPFDTVFI
VNRFLGAVSR AVIASGGQPN QFIGDGVLAL FGLDDTPREA CRNAIRAAAA IAASVDELNG
FIGHDLPEPI RFGIGLHGGE VILGEIGYRD HMVFTALGDS VNVAARLQDM TKALGCETLL
SDEVRETAGV AADQLPTQQV EIRGRVEPML VCPIVQSRDL AAALDQSELM FA
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