Gene RPD_3682 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_3682 
Symbol 
ID4024197 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp4109088 
End bp4109684 
Gene Length597 bp 
Protein Length198 aa 
Translation table11 
GC content66% 
IMG OID637963886 
Producthypothetical protein 
Protein accessionYP_570805 
Protein GI91978146 
COG category[S] Function unknown 
COG ID[COG5400] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.0758613 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCATCG TTTCACGTCG TGCCGCGCTG GCGCTGTTTG CGTCGGCGGC CTTCATCGTG 
CCGGCTGCAG CCCAGCAGCA GCAACCGCTG CCGCCCAGGG CGCAAGCGAG CCCGAGTACC
TACGGGCCTG AAGAACTGAC GAACGCCGGC CACCGATTCT TCGGCAACGT TTCGCGGGGA
TTAGCCTCGG TGATCGAGCG TGCGGTCAGC CAATGGGGGC TGCCCAACGG TTACGTGCTG
GGCGAGGAAG GCTCGGGCGC CTTTGTCGCT GGGTTGCGCT ACGGCGAGGG CACACTCTAC
ACCAAGAACG CCGGCGATCT GCGGGTGTAC TGGCAGGGCC CATCGGTCGG CTTCGACTGG
GGCGGCAACG GCGCGCGCAC CATGACGCTG GTCTACAACC TGCCCTCGAC CAATGCGATC
TACCAGCGCT TCGGCGGCAT CGACGGCTCG GCCTATGTGG TCGGCGGCTT CGGCATGACC
GCGCTCGCCG CCAACGGCAT CGTGCTGGTG CCGATCCAGT CCGGAATCGG ACTGCGGCTC
GGCGCCAATA TCGGCTATCT GAAGTTCACC CCGACCGCGA CCTGGAATCC ATTCTGA
 
Protein sequence
MTIVSRRAAL ALFASAAFIV PAAAQQQQPL PPRAQASPST YGPEELTNAG HRFFGNVSRG 
LASVIERAVS QWGLPNGYVL GEEGSGAFVA GLRYGEGTLY TKNAGDLRVY WQGPSVGFDW
GGNGARTMTL VYNLPSTNAI YQRFGGIDGS AYVVGGFGMT ALAANGIVLV PIQSGIGLRL
GANIGYLKFT PTATWNPF