Gene RPD_3680 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_3680 
Symbol 
ID4024195 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp4107631 
End bp4108467 
Gene Length837 bp 
Protein Length278 aa 
Translation table11 
GC content70% 
IMG OID637963884 
Productinositol monophosphatase 
Protein accessionYP_570803 
Protein GI91978144 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1218] 3'-Phosphoadenosine 5'-phosphosulfate (PAPS) 3'-phosphatase 
TIGRFAM ID[TIGR01331] 3'(2'),5'-bisphosphate nucleotidase, bacterial 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.129491 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGACGG GGCAGGCATT GGGACAAGGA CCGGCCGTTT CGAACGATGC CGCCGCCGCC 
CTGATGCAGC CGCTGACCGA CCTGGTGCTG CGGGCCGGCG CTGCGATCCT GGCGGTCGAC
CGCTCCGCGC CGGTCGAGCA AAAGCCCGAC GGCTCGCCGG TGACGATCGC GGATCTCGCC
GCCGACCGGA TCATTGCCGA AGGGCTGACG CAACTTGCGC TGGGGATTCC CGCGCTGTCA
GAAGAACGGT GCGCGCTCGG TCGCGCCGCC TCGGGCAGCT TCTTCCTGAT CGACCCGCTC
GACGGCACCA AGGATTATGT CGCGGGCCGC GACGAATTCA CCGTCAATCT GGCACTGGTG
ACCGACGGCA AACCGCTGCT CGGCATCGTC GGCGCGCCGG CGCTCGGGCT CGTGTGGCGC
GGACTGGTCG GCCATGGCGC CGAGCGCCTG ACAATCGGCG CCGACGGCAA GGTCGCCACC
GCCGCGCCGA TCCACACCCG ACCGATGCCG TCCACCGGCG ACCCCTGGAT CGTGGCGATC
AGCCGGCTGC ACCTCGACGA CCGTACCGTG GCTTTCATCG AGAGCCGGCC AGGCGCGGTG
CGAGCGCCGA TGGGCTCGGC GCTCAAATTC TGCCGGATCG CCGAAGGCGA GGCCGACATC
TATCCGCGGC TGGCGCCGAC CTGCGAATGG GATATCGCCG CGGGCGCTGC GGTGGTGATC
GCAGCCGGCG GCCGCCTGAC CGACGGCAGC GGCGCCTCGC TGCGGTTCGA CGAGCCGCGG
CCGAATTTCA TTGTGCCGGA ATTCATTGCC TGGGGCGATC CCCGAGCGGC AGGCTGA
 
Protein sequence
MATGQALGQG PAVSNDAAAA LMQPLTDLVL RAGAAILAVD RSAPVEQKPD GSPVTIADLA 
ADRIIAEGLT QLALGIPALS EERCALGRAA SGSFFLIDPL DGTKDYVAGR DEFTVNLALV
TDGKPLLGIV GAPALGLVWR GLVGHGAERL TIGADGKVAT AAPIHTRPMP STGDPWIVAI
SRLHLDDRTV AFIESRPGAV RAPMGSALKF CRIAEGEADI YPRLAPTCEW DIAAGAAVVI
AAGGRLTDGS GASLRFDEPR PNFIVPEFIA WGDPRAAG