| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_3659 |
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| Symbol | |
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| ID | 4024173 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | + |
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| Start bp | 4083145 |
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| End bp | 4085502 |
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| Gene Length | 2358 bp |
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| Protein Length | 785 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637963863 |
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| Product | integrase catalytic subunit |
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| Protein accession | YP_570783 |
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| Protein GI | 91978124 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGACGGACA CGACGTTCGC GCCAGCACCG AGTGCATTAT CGGGGTCCAC GACGGCATTT
GACCTTACGC CAACCGACGT CAAGACAGGC GAACGGTACG CCGTCTTCAT CCCCGATTTT
GACACCCCCG TGGTGCTTGA ATTTCGGAAG GAGCTTTCCA ACGGCTCGTT AAGGTTCGCG
CGGTACGGCA CGGATCTGGA GATCCACTAT CTGAAAGCCG AATGGGACGT CATGCGCTCC
AACGGACGCG CGTGCCGAAT TTCGGACCTC GGACGGCGGG GCAAAGATCC GGGTGAAATA
GAAGATATCG ATCCTTCGGC GCTGTTGGAT CCGGACGAAC AGACCATAAC GGTCAAGGAG
CGCGCCAAGC GTCTCCTCGC CGCGAAGCGT TTGGAAGAAG CGCGGACGCT TCGTTTCTAC
GTTCTTCGGT ATGACGATGC ACCGGCTGGA AAGGGACACG TCGGCGTCGC CAATTTCATC
GGCGAGAACT GGACGGAAGC GCGGGACAAA GGATTCAAAT GGATTCCCTC GTCCGGCGCC
CTGCTGCGTG CCGTGAACGA ATGCGGGGCG CCCGGCGAGC GGCCGCTCTC CGCATTCCTG
AACCGACGGG GCCTCCACAA CCGCAGTCTG CGTTGGCCCA AGTTCACCAC GGACCTCGCC
ATCGTAATGA ATTCGGAATT TTGGTCCAAG CGTGCCAAAC GCAAGACCGA CGTTATCTCC
GATTTCTACG CGGAGTTCGA CCGTGAGAAC GCGGGACGCG AGGAAAAGGA AAAACTGACG
CGTCCTACCA AGGAGACTCT GCGACTTTGG ATCTGCGCTG GCGAGAACTA CTGGAGCTGG
CGGAGCAAGT ACGGTGAGAA GGCGGCACGC CGGCGCTTCA AAGGGCACCA TCGGCCGATT
GAGGCAACTT GCCCCCTCGA ATACGTCATG ATCGACCACA CCCGCATAGA TGCCTGGGCC
GCCATCTACG ACGAGAAGGG CACCAAGGTG CTGGTGGAGC GCCCGTGGCT GACGCTGGCC
ATCGACGTCT ACTCGCGCAT GATCCTGGGC GCCGTTCTTA CCTACGAATC CCCATCCGTC
TATAGCGCTC TTCTCTGCTT GAAGCAGGTG GTGCGCCGCA AGTCCTTCCT GATCGACGAG
TTCGGTTACC ACAAGGGAGC CACCGACGGG TGGGGTCGTC CGACCACGGT AATCGCTGAC
AATGGATGGG AATTCGTGGG CATCTCTTTC CAGGTGTGCT GCGAGGCTGC TGGCATTCAC
GTCATCTGGG CCCCGGTGAA AGCGCCGGAG TTCAAGCCCT ACGTCGAGCG CGTGTTCGGG
ATTCTGAACG AGATGCTCTG GCACCGTCTC GATCAGGGCA TCCCGCTCAA GCCCCAGGAG
ATGACGGCGA TGGGGCTGAC GCCGCACACG AAGGCCGTTC ACACCTTGGA ATGGCTGTAC
CACCGAATGT GGACCGGCAT CGTCACGTTG TATCACGTCG AGGAGCACGG CGCGGACAAG
ATCGTTCCTG CGAAGCGTTG GCGCGAGGGC TTGCTCTCCG ACGGTAGGCC TACGATCGAC
GACGTGCGGG ATCTCGACAA GGCGCTGGGA CGCTCGCAGG TCTGTCTGCT CACCACAAGC
GGGATCACTT TCGACAACCA TCGGTTCCAC GACCCGGACA CGACGAGCAT GTTGCTCGAT
AGGCTGCTCA GGAAAGCGAA AAGAGGAACG CAGCGCAACG GAAGGCTGTC GAGTGGAGTC
GTTGCGGTGC TCTGCACGTA CAGTTCGCAG GACTGTTCAT CGATTAACGT ATGGGACTTT
GTACTCCGCA AAAACGTCTC TCTTCCGAAC TGGAACCGGC GATTCTCCGA GGGGCTTTCT
TTCAAGACGG CTGCCGACAT CCGAAATTTC GCTCGCGTCG AGAACAGGGC GTTTCATTCG
GACGCCGACA AGCACGCGGC GCGTGCCGCG TTCGGACGGT TGATCGGGGA AAAAATCAAG
ACGTTGCCGT TCGGACAGGC CCGCAAGCTG GCCGGCGAGA TCGTCGCCCC TCAGTTGGTA
GCCGGCGACT TCGTCGAGCA AAAGCTGATC GGATCTTCGG CGACCGACGA CCATTCGTTG
GACGTGCCGC AGACCGTAGC GGCAGGTGAG CGTACGGACG ATCGCATTCC GGACAAGGGT
TTTCGTCGCG GCGGCAAGGC CGCTACCCGG AAGGCGACGG CTACCCGCCG CGCAAATATC
GCCGCTGGAA AAAAGGAGGC TGCAAAATTG GAGGCGGCAC CGCCGTCTCC GCGCGTGGCG
AAGACGGCGG TCGGTAAAGG CATGACCGAC ACAGAGGCCG CCGAGCTTCT GGCCTCCTTG
TCCGAAGATC TGGATTGA
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| Protein sequence | MTDTTFAPAP SALSGSTTAF DLTPTDVKTG ERYAVFIPDF DTPVVLEFRK ELSNGSLRFA
RYGTDLEIHY LKAEWDVMRS NGRACRISDL GRRGKDPGEI EDIDPSALLD PDEQTITVKE
RAKRLLAAKR LEEARTLRFY VLRYDDAPAG KGHVGVANFI GENWTEARDK GFKWIPSSGA
LLRAVNECGA PGERPLSAFL NRRGLHNRSL RWPKFTTDLA IVMNSEFWSK RAKRKTDVIS
DFYAEFDREN AGREEKEKLT RPTKETLRLW ICAGENYWSW RSKYGEKAAR RRFKGHHRPI
EATCPLEYVM IDHTRIDAWA AIYDEKGTKV LVERPWLTLA IDVYSRMILG AVLTYESPSV
YSALLCLKQV VRRKSFLIDE FGYHKGATDG WGRPTTVIAD NGWEFVGISF QVCCEAAGIH
VIWAPVKAPE FKPYVERVFG ILNEMLWHRL DQGIPLKPQE MTAMGLTPHT KAVHTLEWLY
HRMWTGIVTL YHVEEHGADK IVPAKRWREG LLSDGRPTID DVRDLDKALG RSQVCLLTTS
GITFDNHRFH DPDTTSMLLD RLLRKAKRGT QRNGRLSSGV VAVLCTYSSQ DCSSINVWDF
VLRKNVSLPN WNRRFSEGLS FKTAADIRNF ARVENRAFHS DADKHAARAA FGRLIGEKIK
TLPFGQARKL AGEIVAPQLV AGDFVEQKLI GSSATDDHSL DVPQTVAAGE RTDDRIPDKG
FRRGGKAATR KATATRRANI AAGKKEAAKL EAAPPSPRVA KTAVGKGMTD TEAAELLASL
SEDLD
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