| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_3646 |
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| Symbol | |
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| ID | 4024160 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | - |
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| Start bp | 4068553 |
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| End bp | 4071723 |
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| Gene Length | 3171 bp |
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| Protein Length | 1056 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637963850 |
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| Product | heavy metal efflux pump CzcA |
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| Protein accession | YP_570770 |
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| Protein GI | 91978111 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG3696] Putative silver efflux pump |
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| TIGRFAM ID | [TIGR00914] heavy metal efflux pump (cobalt-zinc-cadmium) |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.556421 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCGACG CCGTCCTTGC CTTTTCGGTC CGCCAGCGCT GGCTGGTGAT GATAGGCGTC
CTGTTGATGG CTGCCTTCGG AGCCTGGAAC TTCAGCAGGC TGCCGATCGA CGCCGTTCCC
GACATCACCA ACGTGCAGGT GCAGATCAAC ACCAACGCCC CAGGTTACTC CCCGCTCGAA
GTCGAGCAGC GCATCACCTT TCCCATCGAG ACCGCGATGG GTGGCCTGCC GAACCTCGTC
AACACCCGCT CGCTGTCCCG CTACGGCCTC AGCCAGGTGA CGATCGTCTT CAAGGACGGC
ATCGACATCT ATTTCGCCCG CCAACTCGTC AACGAACGCG TGCAGCGCGT GAAGGACATG
CTGCCCACTG GCATCGAGAC CGCGATGGGC CCGGTTTCCA CGGGATTGGG TGAGATTTAT
CTTTACACCG TAGAAGCCAA GCCGGGCACG AAGAACGCCG AGGGCCAGCC GTTCAGTCCG
ACCGACCTGC GCACGGTGCA GGACTGGATC ATCAAACCGC AGTTGCGGAA CGTCACCGGC
GTGAACGAAG TCAACACGAT CGGCGGCTTC GAGAAGCAGT TCCACGTGCT TCCGGATCCG
AGCAAGCTGA TGGCGTACCG TCTCAGCTTC CGCGACGTGA TGGCGGCGCT GGCGGCGAAC
AACGCCAACG TAGGAGCGGG CTACATCGAA AAGAACGGCG AGCAGTACCT CGTGCGGACG
CCCGGCCAGG TCGCCAACCT CGAAGAGATC GGGCAGATCG TGATCGGCTC CCGCGGCGGC
GTCCCCGTCC GCATCTACGA CGTCGCCGAG GTGAAGGAAG GCAAGGACCT CCGCACCGGC
GCGGCAACCC TGGACGGCCA CGAAATGGTC ATGGGCACGG CGATGCTGCT GATCGGTGAG
AACAGCCGGA CGGTGGCGCA GCGCGTGGCC GCCAAGCTGG AGCAGATCGG CAAGTCGCTT
CCGGACGGCG TGACCGTCCG GGCGATCTAC GACCGGACGC ATCTGGTCGA TGCGACGATC
GCGACCGTCG AGAAGAACCT GGTCGAGGGC GCTCTTCTGG TGATCGTCAT CCTGTTTCTG
ATCCTCGGTA ACTTCAAGGC GGCGATCGCG ACCGCCCTCG TCATTCCCCT GGCCATGCTG
TTCACGATCA CCGGGATGTT CGAGAACAAG GTCAGCGCGA ATTTGATGAG CCTCGGCGCC
ATCGACTTCG GCATCATCAT CGACGGCGCC GTGATCATCG TCGAGAATTG CCTTCGTCTT
CTCGCCCACG AACAGGCGAA GCGCGGCCGG ATTCTGACGC GGGAAGAGCG CTTCGAGACG
ATCATCGCGG GCTCGCGCGA GGTCATCAAG CCGAGCCTTT TCGGCACGTT GATCATCGCC
GTCGTCTATC TGCCGGTCCT GACGCTGACG GGGGTCGAAG GCAAGATGTT CACGCCGATG
GCGCTGACGG TCCTGATCGC GCTGTTGGGC GCCAGCCTTC TTTCGATGAC GTTCGTCCCC
GCTGCCGTGG CACTCATGGT CACCGGCAAG GTGTCGGAAA AGGAGAACTG GTTCATGCGG
CTGGCGCATC GGTCCTACGT GCCGATGCTG GACTTGGCCA TCCGCTTCCG GGCAGTGGTG
GCCGTGTTGG CCGTCGTGCT GATGGTCGCC AGCGGATATG CGGCATCGCG CATGGGCGGC
GAGTTCATTC CGAGCCTGGA CGAGGGCGAC ATCGCCATCC AGGCGATCCG CATTCCCGGG
ACGAGCCTGA CCCAGTCGCT GGAGATGCAG ATGGCTCTGG AGAAACGCCT GCTCAAGATT
CCGGAGGTCA AGGAGACCTT CGCGCGCACC GGAACTGCCG AGGTGGCCAC CGATCCGATG
CCTCCGTCGA TCTCGGACGG CTACGTGATG CTGAAACCGC GCGACCAGTG GCCGGACCCG
AAGAAGCCGA AGTCCGAACT GGTGAAGGAG ATCGAGGAGG CGTCCGAGGA GGTTGCGGGC
AGCAGCTACG AATTGTCCCA GCCGATCCAA TTACGCTTCA ACGAATTAAT CTCCGGCGTC
AGGAGCGACG TCGGCGTGAA GATCTTCGGA GACGATCTGG AGGTGCTGGC ACAGGTCGCC
GGCCAGGTGC AGACGGTGCT CCAGGCCGTG CCGGGCGCTG CGGACGTGAA GACCGAACAG
GTCGCCGGCC TGCCGGTGCT GACCGTGAAG CTCGACCGCA AGGCTCTGGC CCGCCTCGGC
ATCAGCGTCA CGGACGTGCA GAGCCTCGTC GAGATCGCGG TCGGCGGTAA GAGCGCCGGT
CTCGTCTTCG AAGGCGATCG TCGCTTCGAT CTCGTCGTCC GTCTTCCGGA GGACAGGCGC
TCCGACATCG AGGCCATGAA GTCGCTTCCG ATCCCGCTGC CGCCCGTCGA TGGTCAAGCG
AAGGTCCAGC CAGCCGTTCT CGGTACTTCG CCGCTCAACC AGATGCGCTA CGCGCCGTTG
TCGGAGCTCG CAGAGATTTC CGTCTCGCCG GGTCCGAACC AGATCAGCCG CGAGGACGGG
AAGCGGCGCA TCGTCGTGTC CGCCAACGTT CGTGGCAGGG ATCTCGGATC GTTCGTGACG
GATGCCCAGA GCCAGATCGC TCAGAAGGTG AAGCTGCCTG CGGGTTATTG GATCGGCTGG
GGTGGCCAGT TCGAGCAGCT CGTCTCGGCG ACGCAGCGGC TCACGATCGT GGTCCCGATC
GCGCTGCTTC TGATCCTGCT GCTGTTGTTC ATCAGCCTGG GATCGGCCGC CGATGCGTTC
CTGGTGTTCA GCGGCGTGCC GCTCGCGCTG ACCGGAGGCA TCTTCGCGCT CGTCCTGCGG
GGCATACCCC TGTCGATCAG CGCCGGCATC GGGTTCATCG CCCTCTCAGG GGTCGCGGTG
CTCAACGGTC TGGTGATCAT CACCTTCATC GAGCGGCTGC GTCATGAGGG CAAGACGATC
ATGGAAGCCG TCCACGAAGG GGCGTTAACC CGCTTGCGGC CCGTCTTGAT GACGGCGCTC
GTCGCATCGC TGGGCTTCGT TCCGATGGCG ATCGCCACCG GCGCCGGCGC CGAAGTGCAG
CGGCCGCTGG CGACCGTCGT CATCGGCGGA ATCATCTCGT CGACCATCCT GACGCTTCTC
GTTCTTCCGG CGCTCTACAT CCTGTTCCGC CGGGAATCGT CGCCTGCCTA A
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| Protein sequence | MIDAVLAFSV RQRWLVMIGV LLMAAFGAWN FSRLPIDAVP DITNVQVQIN TNAPGYSPLE
VEQRITFPIE TAMGGLPNLV NTRSLSRYGL SQVTIVFKDG IDIYFARQLV NERVQRVKDM
LPTGIETAMG PVSTGLGEIY LYTVEAKPGT KNAEGQPFSP TDLRTVQDWI IKPQLRNVTG
VNEVNTIGGF EKQFHVLPDP SKLMAYRLSF RDVMAALAAN NANVGAGYIE KNGEQYLVRT
PGQVANLEEI GQIVIGSRGG VPVRIYDVAE VKEGKDLRTG AATLDGHEMV MGTAMLLIGE
NSRTVAQRVA AKLEQIGKSL PDGVTVRAIY DRTHLVDATI ATVEKNLVEG ALLVIVILFL
ILGNFKAAIA TALVIPLAML FTITGMFENK VSANLMSLGA IDFGIIIDGA VIIVENCLRL
LAHEQAKRGR ILTREERFET IIAGSREVIK PSLFGTLIIA VVYLPVLTLT GVEGKMFTPM
ALTVLIALLG ASLLSMTFVP AAVALMVTGK VSEKENWFMR LAHRSYVPML DLAIRFRAVV
AVLAVVLMVA SGYAASRMGG EFIPSLDEGD IAIQAIRIPG TSLTQSLEMQ MALEKRLLKI
PEVKETFART GTAEVATDPM PPSISDGYVM LKPRDQWPDP KKPKSELVKE IEEASEEVAG
SSYELSQPIQ LRFNELISGV RSDVGVKIFG DDLEVLAQVA GQVQTVLQAV PGAADVKTEQ
VAGLPVLTVK LDRKALARLG ISVTDVQSLV EIAVGGKSAG LVFEGDRRFD LVVRLPEDRR
SDIEAMKSLP IPLPPVDGQA KVQPAVLGTS PLNQMRYAPL SELAEISVSP GPNQISREDG
KRRIVVSANV RGRDLGSFVT DAQSQIAQKV KLPAGYWIGW GGQFEQLVSA TQRLTIVVPI
ALLLILLLLF ISLGSAADAF LVFSGVPLAL TGGIFALVLR GIPLSISAGI GFIALSGVAV
LNGLVIITFI ERLRHEGKTI MEAVHEGALT RLRPVLMTAL VASLGFVPMA IATGAGAEVQ
RPLATVVIGG IISSTILTLL VLPALYILFR RESSPA
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