Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPD_3643 |
Symbol | |
ID | 4024157 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB5 |
Kingdom | Bacteria |
Replicon accession | NC_007958 |
Strand | - |
Start bp | 4064637 |
End bp | 4066817 |
Gene Length | 2181 bp |
Protein Length | 726 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 637963847 |
Product | heavy metal translocating P-type ATPase |
Protein accession | YP_570767 |
Protein GI | 91978108 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG2217] Cation transport ATPase |
TIGRFAM ID | [TIGR01494] ATPase, P-type (transporting), HAD superfamily, subfamily IC [TIGR01511] copper-(or silver)-translocating P-type ATPase [TIGR01512] heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase [TIGR01525] heavy metal translocating P-type ATPase |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.545825 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCGGAAG CCGTAGCTGC CGATCAGACC AGGATGCGCG TCGAAGGCAT GGACTGCGCG TCCTGCGCGG TGAAGATCGA GAACGCGCTG CGCCGCGTGC CGGGAGTAAC CGACGTTGCC GTCTCGGTGG CGGCCGGAAA CGTGACCGTC AGACACGATG GCGCCGATTT CGGCACATTG GCCGCCCGGA TCACCGCATT GGGCTACAAG GTCACCCCTG CCGACGAGAA GGGTATCGAT GCGCCTCACG GCCATGGCGG CGCATCTCAC GACCATGACG ACGGCCACTC GCACGGTCAC GACCACGGTC CCACCGACGG GTCATGGTGG CGGACATCCA AAGGCATCCT GACAATCGCT TCCGGAACGG CGCTAGGAGC GGCGTTTTTG ATCGGGAAGA TCGCGCCGGC CACGGAAAAG TGGGCGTTTC TCGTCGCGAT GCTGGTCGGG TTGATCCCGA TCGGTCGCCG CGCTTTCTCC GCCGCGATAT CGGGTACGCC GTTCTCGATC GAGATGCTGA TGACGATCGC GGCGATCGGC GCCGTCTTCA TCGGCGCCAC GGAAGAGGCC GCCGCCGTCG TATTCCTGTT CCTCATCGGC GAACTGCTCG AAGGAGTCGC CGCAAGCAGG GCGCGCGCAA GCATTCAGGA TTTGACCAAG CTCGTCCCGA AGACAGCGAG ATTGGAGGAG AACGGACAGG TCCGCGAGGT GCAGGCGGAC ACGCTGGTGG TAGGATCGAT GATCCAAGTT AGACCAGGCG ACCGGATTCC GGCTGACGGC GTCATCGTCT CCGGAGAGAG CTCCGTCGAC GAGGCCCCCG TGACCGGCGA AAGCACGCCC GTCCGGAAGG GCCGCGACGA GAGCCTGTTC GCGGGCACCA TCAACGGCGA CGGGTTGCTC AGTATACGCG TGACCGCTGC CGCTGCGGAC AACACGATCG CGCGGGTGGT CCGGCTAGTC GAGGAGGCCC AAGAATCCAA GGCGCCCACG GAACGTTTCA TCGACCGCTT TTCCCGGTAC TACACGCCCG GCGTCGTGGT GGTCGCATTC CTGGTAGCCG TCGTCCCGCC GCTGCTGTTC GGCGGAATCT GGAGCGAATG GGTCTACAAG GGGCTGGCGA TCCTTTTGAT CGGATGTCCG TGCGCCCTGG TGATCTCGAC GCCCGCGGCG ATCGCCGCCA GCCTCTCCGC CGGTGCACGC CGTGGACTGC TGCTCAAGGG CGGCGTCGTC CTCGAGCAGA TGGGCAAGAT CACGCTCGCG TGCTTCGACA AGACCGGGAC GCTGACGGCA GGTAAACCGG TCGTGACCGA CGTGCTGTCG TTCGGCGCTG CGGAGAACGA GGTGCTGCGC CTCGCGGCGG CGCTGGAGAC GGGGTCCAGC CATCCGCTGG CGATCGCGAT CCTCGCCGAA GCCTCGAAGC GGGGCATCGT GCTGCCGTCC ACATCGGGAT CGCAGGCGTT CGGAGGCAAG GGCATCAAGG CGACCGTGGA TGGCCAGCAG ATCTTCCTAG GGTCGCCGAA GGCGGCCGAG GAAATCGGTG TTCTGGATCT CGAGCATCAA GGCCGTGTCG CGGCTCTCAA CGACGAGGGC AAGACCGTTT CGATCTTGAC GGTCGGAACG ACGATGGCGG GAGCGATCGC CATGCGCGAC GAGCCCCGCC CCGACGCCGC AAAGGGGCTT AAGCTGCTGA CCGACGCCGG AATCCGGACG GTCATGCTGA CCGGAGACAA CCGCCGGACC GCCACGGCGA TCGGCAAGTC GCTCGGGATC GAAGTGCAGG CCGGGCTCCT GCCGCAGGAC AAGCAGCGGA TCGTCGCGGA TTTTCAAGCA CAGGGTTTCA CCGTTGCGAA GATCGGCGAC GGCATCAACG ACGCGCCGGC GCTCGCCGCC GCCGATGTCG GGATCGCGAT GGGCGGCGGC ACCGACGTCG CCCTGGAGAC CGCCGACGCC GCCGTTCTTC ACGGCAGGGT CGCCGATGTG GCCGCGATGG TCGACCTCTC GAAACGCACG ATGCTCAACA TCAAGCAGAA CATCACGGTC GCGCTCGGCC TAAAGGCGGT CTTCCTCGTC ACTACGGTCA TCGGCCTCAC CGGCCTGTGG CCGGCGATCC TCGCCGACAC CGGTGCCACG GTGCTCGTCA CGCTGAACGC CCTCCGGCTG CTGAAGCCGT CGAAAATCTA G
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Protein sequence | MPEAVAADQT RMRVEGMDCA SCAVKIENAL RRVPGVTDVA VSVAAGNVTV RHDGADFGTL AARITALGYK VTPADEKGID APHGHGGASH DHDDGHSHGH DHGPTDGSWW RTSKGILTIA SGTALGAAFL IGKIAPATEK WAFLVAMLVG LIPIGRRAFS AAISGTPFSI EMLMTIAAIG AVFIGATEEA AAVVFLFLIG ELLEGVAASR ARASIQDLTK LVPKTARLEE NGQVREVQAD TLVVGSMIQV RPGDRIPADG VIVSGESSVD EAPVTGESTP VRKGRDESLF AGTINGDGLL SIRVTAAAAD NTIARVVRLV EEAQESKAPT ERFIDRFSRY YTPGVVVVAF LVAVVPPLLF GGIWSEWVYK GLAILLIGCP CALVISTPAA IAASLSAGAR RGLLLKGGVV LEQMGKITLA CFDKTGTLTA GKPVVTDVLS FGAAENEVLR LAAALETGSS HPLAIAILAE ASKRGIVLPS TSGSQAFGGK GIKATVDGQQ IFLGSPKAAE EIGVLDLEHQ GRVAALNDEG KTVSILTVGT TMAGAIAMRD EPRPDAAKGL KLLTDAGIRT VMLTGDNRRT ATAIGKSLGI EVQAGLLPQD KQRIVADFQA QGFTVAKIGD GINDAPALAA ADVGIAMGGG TDVALETADA AVLHGRVADV AAMVDLSKRT MLNIKQNITV ALGLKAVFLV TTVIGLTGLW PAILADTGAT VLVTLNALRL LKPSKI
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