Gene RPD_3624 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_3624 
Symbol 
ID4024138 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp4040638 
End bp4041081 
Gene Length444 bp 
Protein Length147 aa 
Translation table11 
GC content67% 
IMG OID637963828 
Producthypothetical protein 
Protein accessionYP_570748 
Protein GI91978089 
COG category[S] Function unknown 
COG ID[COG4731] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.13672 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTGCCC GAACTGCTCT CGTTGCCGCT GCGTTGCTCG CTGTGCTGGC GCCCGCTGTC 
GCGAACGCGC AATCGGCGTC CGGTCCGCAA GGCACCTGGC TGACCCAAGC CGGCGACGCC
AAGGTGCGGA TCAAGAGCTG CGGCGCGGCG CTGTGCGGCA CAATCGTTTG GCTGAAACAG
CCGATCGACC CGAACACCGG CAAGCCGCAG GTCGACGACA AGAATCCCGA CCCGGCGCGC
GCCTCGCGAA CGGTGATCGG ACTGCAGATT TTCGGCGACA TGCGGCCGGT CTCGCAGGGC
AAATGGTCGG GACACATCTA CAATGCCGAT GACGGCAAGA CCTATGAGAG CAGCATCTCC
CACACCGGGC CGACGACGCT GAAGGTCGAG GGATGCGTCG GCGCGCTGTG CGGCGGCGAG
GCCTGGACGC TCACCGGTCG CTAG
 
Protein sequence
MTARTALVAA ALLAVLAPAV ANAQSASGPQ GTWLTQAGDA KVRIKSCGAA LCGTIVWLKQ 
PIDPNTGKPQ VDDKNPDPAR ASRTVIGLQI FGDMRPVSQG KWSGHIYNAD DGKTYESSIS
HTGPTTLKVE GCVGALCGGE AWTLTGR