| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_3619 |
|---|
| Symbol | |
|---|
| ID | 4024133 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris BisB5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007958 |
|---|
| Strand | + |
|---|
| Start bp | 4035844 |
|---|
| End bp | 4036332 |
|---|
| Gene Length | 489 bp |
|---|
| Protein Length | 162 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 637963823 |
|---|
| Product | CinA-like |
|---|
| Protein accession | YP_570743 |
|---|
| Protein GI | 91978084 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1546] Uncharacterized protein (competence- and mitomycin-induced) |
|---|
| TIGRFAM ID | [TIGR00199] competence/damage-inducible protein CinA C-terminal domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.45601 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 0.692675 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGGATC TCGTCACCCT GGCCGAAAAG GTCGCCGTTC GGCTGATCGC GCGGAAGCAG
ACGATCGCAG TCGCAGAATC GTCGACCGGC GGACTGATCG CGGCGGCGCT GCTCGCCGTA
CCCGGCGCCT CGGCCTACTT TCTCGGCTCT GCTGTGGTCT ACACCCGCGA GGCGCGGCGC
ATCCTGATGG ACATCCCCGA TCCGCAGATG AAGGGGCTGC GCTCGTCTTC CGAGCCCTAT
GCGGAGTTGC TGGCGAAGCA GATGCGGGCG CGGCTCTCCT GCGACTGGGC GCTGTCGGAG
ACCGGCGCGG CCGGCCCCGG CGGCAATCAC TACGGCGACG CCGCCGGCCA CACCTGCATT
GCGGTCGCCG GTCCCGCACA AGCGGCGATG ACGCTGGAGA CGGGGAGCGC CGACCGGCTC
GACAACATGC AGATGTTCGC CAGCACGGCG CTGACGTTTC TGCTGCACAA TCTGGCAAAG
CAGACGTAA
|
|---|
| Protein sequence | MKDLVTLAEK VAVRLIARKQ TIAVAESSTG GLIAAALLAV PGASAYFLGS AVVYTREARR
ILMDIPDPQM KGLRSSSEPY AELLAKQMRA RLSCDWALSE TGAAGPGGNH YGDAAGHTCI
AVAGPAQAAM TLETGSADRL DNMQMFASTA LTFLLHNLAK QT
|
|---|
| |