| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_3609 |
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| Symbol | |
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| ID | 4024123 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | - |
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| Start bp | 4021580 |
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| End bp | 4022338 |
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| Gene Length | 759 bp |
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| Protein Length | 252 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637963813 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_570733 |
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| Protein GI | 91978074 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGTTGA AAGACGTCTC CGTTCTCATC ACCGGCGGAG GGTCGGGGCT CGGCGCCGCG
ACAGCGCAAG CGATGGCCGC CAAGGGCGCC AAGGTCGCAG TGCTCGACAT GAACAAGGAC
AACGCCGAGA AGGTCGCCGC TGAAATCGGC GGCGTCGCCT GCGTGGGCGA CGTGTCGCAG
GAGGCCCCGG TCAAGGAAGC GATCGCCAAG GCCGAAGCCG CGCACGGCAT CGTTCGCGTG
CTGGTGAACT GCGCCGGCAT CGGCGGCGCG GTGAAGACCG TCGGCAAGCA GGGCGCCTAT
CCGCTCGATC ATTTCTCGCG CATCATCAAC GTCAACCTGA TCGGCAGCTT CAACTGCATC
CGGCTCGTCG CCGAGCGGAT GCAGAGCGCG CCGACCATCG GCGAAGAGCG CGGCGTCTGC
ATCAACACCG CGTCGGTCGC GGCGTTCGAC GGCCAGATCG GCCAGGCGGC GTATTCGGCG
TCGAAGGGCG GCATCGTCGG CATGACCCTG CCGGTGGCGC GCGACCTCGC GTCGCTGAAC
ATCCGCGTCA TGACCATCGC GCCGGGCCTG TTCCTGACGC CGCTGCTGAT GGGTCTGTCG
GAAGAAGCGC GCAAGAGCCT CGGCGCCCAG GTGCCGCATC CGGCGCGTCT CGGCGATCCG
TCCGAATACG CTTCGCTCGC GGTGCAGATC GTCGAGAACC CGATGCTGAA CGGCGAGACC
ATCCGTCTCG ACGGCGCGAT CCGCATGGCG CCGCGCTAG
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| Protein sequence | MQLKDVSVLI TGGGSGLGAA TAQAMAAKGA KVAVLDMNKD NAEKVAAEIG GVACVGDVSQ
EAPVKEAIAK AEAAHGIVRV LVNCAGIGGA VKTVGKQGAY PLDHFSRIIN VNLIGSFNCI
RLVAERMQSA PTIGEERGVC INTASVAAFD GQIGQAAYSA SKGGIVGMTL PVARDLASLN
IRVMTIAPGL FLTPLLMGLS EEARKSLGAQ VPHPARLGDP SEYASLAVQI VENPMLNGET
IRLDGAIRMA PR
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