| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_3603 |
|---|
| Symbol | |
|---|
| ID | 4024117 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris BisB5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007958 |
|---|
| Strand | - |
|---|
| Start bp | 4013828 |
|---|
| End bp | 4014526 |
|---|
| Gene Length | 699 bp |
|---|
| Protein Length | 232 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 637963807 |
|---|
| Product | nitroreductase |
|---|
| Protein accession | YP_570727 |
|---|
| Protein GI | 91978068 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0778] Nitroreductase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.0181645 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCGACG CTGCCGCGAC CACTGCCCCG ATCGACGTGC TCGAAGAGCT GATGGCCGCG
CGCTATTCGT GTCGGGCGTT CAGGCCCGAT CCGGTGCCGC GCGAGACCAT CGACCGGATG
CTCGCCGCTG CGCAGAAGAC GGCGTCGTGG TGCAACAGCC AGCCCTGGCA GGTGCTGATT
ACGTCCGGCG AGGCGACCCG AAAGTTTCGC GACGTGATCT ACAACGTCGC CGCGAGCGGC
GCGCCGGCGA GCGGGGATTT CGAATTCCCG CGCGAGTATC GCGGCGTGTA TCTCGAGCGC
CGCCGCGAGA GCGGCTTCCA GCTCTACAAC ACGCTCGGGA TCGCCAAGGG CGACAAGATG
GCCTACGCCA AGCAGGCACT GGAGAATTTC AACTTCTTCG GCGCGCCGCA TGTCGCGATC
ATCACCACCG ACGAGGCGCT CGGCGTCTAC GGCGCGATCG ACTGCGGCGG CTACGTCACC
TCCTTGATGC TGGCGGCGCA GGCGCTCGGC CTCGCCACCG TGCCGCAGGC GGCGCTGGCG
TTCCATTCGG GCGTCGTGCG CAAGCATTTC GGGCTCGGCG ACGACCGCCG CGTGGTGTGC
GGCATCTCGT TCGGCTACGC CGACCGCGCG CACAAGGCCA ACAGCTACCG CACCAGCCGC
GCCGCGCTCG GGGAAGTCGC GACGTTCGTG GAGCAGTAG
|
|---|
| Protein sequence | MTDAAATTAP IDVLEELMAA RYSCRAFRPD PVPRETIDRM LAAAQKTASW CNSQPWQVLI
TSGEATRKFR DVIYNVAASG APASGDFEFP REYRGVYLER RRESGFQLYN TLGIAKGDKM
AYAKQALENF NFFGAPHVAI ITTDEALGVY GAIDCGGYVT SLMLAAQALG LATVPQAALA
FHSGVVRKHF GLGDDRRVVC GISFGYADRA HKANSYRTSR AALGEVATFV EQ
|
|---|
| |